| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | plpp0028 |
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| Symbol | |
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| ID | 3118033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Legionella pneumophila str. Paris |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006365 |
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| Strand | + |
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| Start bp | 22313 |
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| End bp | 24889 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637578533 |
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| Product | hypothetical protein |
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| Protein accession | YP_122183 |
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| Protein GI | 54295871 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
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| TIGRFAM ID | [TIGR02746] type-IV secretion system protein TraC |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0798103 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCGCAA CACTAAAAAA ATACGTCCAG GGTTTTAGGA ATTCAATTGA TGATTATTTG
GTGGATGGGG AAGAATCGTC TTCCCAAAAT ACCTTAAATG TTGGCGATCA CCAATACCCT
CTTTTTTGCA AGGAACTTCC TTATCAGTAT TATGACGAGG AATCGCATTT ATTTATTAAT
CGCTGGAACA CAGGCTTATT GTATCGCATC ACCCCGTTAA CCGGTGCGAA TGAAAAAATT
GCAGAGCAGT TGGACTCGAT TTTAAGAACC AAGGTTTCTG ATGAATTTAC CTTACAGCTC
ATCTTAGTCA AACACAATCA AGTGGGGCAT GAGCTGGATG CTTTTTCAAA CCAGTTCATG
ACTCCAGATT TTGAACAGTT AAGTGTGATG GGCAAAAGCC TTCGTTCGTT TTATGGTGAG
GCCGCAGTTC ATGGATTTAA AACCAATACC AATGTTAATC CTCGAATTAC ACAAACTGAA
TGTTATGTCG TTGTCGATAA AATCAAGGGA AAAAATGAGG AAGAGGTTAA AGCCTGCTTT
GCTCAATTTC GTATTGCCTT TGAAGCCTCG TTGATGTCGG CCAAAATTGG CTTTAGAACC
TGTAATGCTG AAGATTTATT ACGCTTACTT CATTTTTACC TGGCTCATGA ACCCGATAAT
ATTTACCCCA AATCCTCCTC TTATGATCCA ACGCAACTCA TTAAGCATCA GGTGGTTGGC
CGTGATTTTG ATGTAGAGGT AGCCAAAGAA GGCCTGCTTT TTAGTGGGGT TAATAATCAA
GGAAAGGCTT TTGAAACTGT GGGTTCCGTG ATGACCATCG ATGGTTTACC GAGTGAGTAC
CATCTTTGGG ACAACATTAA TAACAGTGCC AATATTTTTC ATCCAGAACA AAGCATCCCC
TGTAATCACA TTATTTCTGT TACTTATCTG GTTGACGAAC AAAATAAAGC GCAGGGACGT
GCGAATCGCA AGACCAGTGA TTTGGATAAA AAAGCGAAAG GCGATTATGC GCTGCATGTT
GCCGGTACAG AAAAAAAAGC GCGTGAATGG CGTCATTTTC GTGATGATTT GGCTTCAGGA
AAGACGCGTT CTTGTAAGAT GCTGTATAAC GTCGTGCTAT TTTCCAGACG TTCCGAATAT
GCCCGCGATG TGGAAGCAGC TCGTACCTGT TTTTCTTATA ACGGTATTAA GCTCGCGCTA
AGCCGTAGGA TGCAATCTCC CTATTTTCTA GCAACATTGC CTTTTTTATT TACGAATCAT
CTCCAAAAAG GATTTCAGCT ACCCACGATG ATGTGGCCTA TTTCCTCATG GAATGCGACT
CAATACATGC CTATTCTTTC GGATTGGTCG GGTACGGGAT CGGGCATTTT ATTGCCGACA
CTACGCAACC AATTTTCTTG TATTGATCCA TTCTCAGGTA AGTTGGGCAC GAATTACAAC
ATTTCTGTGA CCGGCACATC AGGCGGGGGA AAGAGTTTTT TTATTCAAAT GCTGATGCTC
AACGTGCTGT TCAACGGCGG GGATCTCTTT ATTGTCGATG TCGGGGGAAG TTATAAGAAG
TTATGCCACA CCTTAGGCGG TGTGTATCTG GAATACTCCA ATTTGGCAAT GAATCCCTTT
ACTCATGTCA CGAATATTGG CAAAGAAATA CAGCATATTC TTTCTTTGTT TCAATTATTA
GCGTGCGCTA AGGATGGAGC CAGTGATGAT GACCGAGGAA CGTTACGAGA GGCAATATTG
CAGGCGTTTT TTGAACATCA GCAAGCCACA TTAATTGATC ATGTGCAGGC TAAGCTTCTG
GAGTTGCATC AGAACGACCG AGAAAAATAC CCTACAGGGA AAATTCTGGC GAAAAATCTT
GATCCCTATT GCACTCATTC AGAGCATGGT ACGGTCTTTA ATGCGCCTTC TAAGTTAGCG
CCTGATGCAC GCATTATTGT CGTGGATTTA AAAGAAATTG AGGACGATGA ACACATTCGT
GCACCGGTTT TACTGTCTAT TTTGTCTCAG TTTCAAGGCC GTATGTTTAA TTCCGATCGT
AGCCGTCAAA AAATGTGCAT CATTGATGAA GCCTGGTCCT TATTCTCTGG CGATCAAATT
GCAGTGAATT TCATTAACCG AGGGTTTCGT ACAGGGCGGC GGCATAATGC TTCTTTTGTG
ACGATCACGC AAGGTATCGA TGATTATTAC GCCTTCCCTG AAGCACGTGC TGCTTGGGAA
AATTCTGCTA TCAAACTCAT TTTTCTTCAA GATGGAGATT CCCTTGTCAA GCACCAACAA
GAGCATAACA CGTTTTCTGA TTTTGAATTT AAATTACTTT CTTCTTTTCC TAAAGCGAAG
GACGCTGGAT TTTCACAAGT TCTGATTCGT GCAGACGGTA TTTCCTCGTT TCATCGGCTC
TTTGTTGATC CGTTTACACG GGTCCTATTG TCTTCTGATG GACGCGATTA TCAAGCGGTA
ATGAATTACA TCGCGCAGGG GCGATCGTAC ATTCATGCCG CCATGCTGGT AGCCAACAAA
CACTATGGCC TATCCAAAAA CGTGTTAGTG GAAGGAGGGC TTGCTGATGC TGCGTAA
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| Protein sequence | MFATLKKYVQ GFRNSIDDYL VDGEESSSQN TLNVGDHQYP LFCKELPYQY YDEESHLFIN
RWNTGLLYRI TPLTGANEKI AEQLDSILRT KVSDEFTLQL ILVKHNQVGH ELDAFSNQFM
TPDFEQLSVM GKSLRSFYGE AAVHGFKTNT NVNPRITQTE CYVVVDKIKG KNEEEVKACF
AQFRIAFEAS LMSAKIGFRT CNAEDLLRLL HFYLAHEPDN IYPKSSSYDP TQLIKHQVVG
RDFDVEVAKE GLLFSGVNNQ GKAFETVGSV MTIDGLPSEY HLWDNINNSA NIFHPEQSIP
CNHIISVTYL VDEQNKAQGR ANRKTSDLDK KAKGDYALHV AGTEKKAREW RHFRDDLASG
KTRSCKMLYN VVLFSRRSEY ARDVEAARTC FSYNGIKLAL SRRMQSPYFL ATLPFLFTNH
LQKGFQLPTM MWPISSWNAT QYMPILSDWS GTGSGILLPT LRNQFSCIDP FSGKLGTNYN
ISVTGTSGGG KSFFIQMLML NVLFNGGDLF IVDVGGSYKK LCHTLGGVYL EYSNLAMNPF
THVTNIGKEI QHILSLFQLL ACAKDGASDD DRGTLREAIL QAFFEHQQAT LIDHVQAKLL
ELHQNDREKY PTGKILAKNL DPYCTHSEHG TVFNAPSKLA PDARIIVVDL KEIEDDEHIR
APVLLSILSQ FQGRMFNSDR SRQKMCIIDE AWSLFSGDQI AVNFINRGFR TGRRHNASFV
TITQGIDDYY AFPEARAAWE NSAIKLIFLQ DGDSLVKHQQ EHNTFSDFEF KLLSSFPKAK
DAGFSQVLIR ADGISSFHRL FVDPFTRVLL SSDGRDYQAV MNYIAQGRSY IHAAMLVANK
HYGLSKNVLV EGGLADAA
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