Gene BMAA1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1943 
Symbol 
ID3086329 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand+ 
Start bp2132672 
End bp2133301 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content67% 
IMG OID637565811 
Producthypothetical protein 
Protein accessionYP_106467 
Protein GI53716165 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.366238 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGGCG GCTTCGCGAA CGATCGCCTC TACGGCGCGG CGCTCCAATA CCAGCGCGGT 
GGCCTGACGG TCGGCGCGTC GTACCCGAAG ATGAACCGCG CGCGCAGCGC GGATGCCGCG 
GGCGCCGTCA CGGGCGACAA CACGTTCGAC GCATCGTCGC AGCAGAACGT CGGCATCGGC 
GCGACCTACG CATTCTCGAA GGCGCTGATC GGCTTCGCGT ATTCGCACGT CGACGTCTAC 
GATCCCACCT CGAACGCATA CTTCACCGGC ACGACGCGGC CCGCGGGCGG GCACTGGCAA 
TCGTGGAAGT TCGACCACTT CGAGATCAAC GGCCGCTATC GCGTGACGCC CGCGTTCTAC 
GCCGGCGCCG CGTACACGTA TACGCAGGCG CGCGTCGATT CGACGGCCGG CGCATTCCAT 
CCGAAGTGGC GCCCACTGAG CACGAAGCTC GACTACGATC TGTCGAAGCG CTCGTCGGGG 
TTCGCCGAAG GCGTCTACCA GCACGCGCAG CACGCGATGA ATGCGCGCAC GGGCACCGAT 
TTCGACCATG CGTACATCCC GGGCGCGGCG AATATCGCGT CGGGACCGAA CCAGTACGTC 
GTGCGGCCCG CGCTGCCGCA CCCGTTCTGA
 
Protein sequence
MAGGFANDRL YGAALQYQRG GLTVGASYPK MNRARSADAA GAVTGDNTFD ASSQQNVGIG 
ATYAFSKALI GFAYSHVDVY DPTSNAYFTG TTRPAGGHWQ SWKFDHFEIN GRYRVTPAFY 
AGAAYTYTQA RVDSTAGAFH PKWRPLSTKL DYDLSKRSSG FAEGVYQHAQ HAMNARTGTD 
FDHAYIPGAA NIASGPNQYV VRPALPHPF