Gene BMAA1933 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1933 
Symbol 
ID3087285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp2122642 
End bp2123889 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content72% 
IMG OID637565802 
Productputative D-amino acid dehydrogenase, small subunit 
Protein accessionYP_106459 
Protein GI53715944 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTT GCGTATTGGG CGCGGGCGTC GTCGGCCTGA CGAGCGCCTA TTGCCTCGCG 
CGGGAAGGGC ACGACGTGAC GGTGCTGGAA GCGCGCCCGG ACGCCGTGCT CGACGCCAGC
TTCGCGAACG GCGGACAGCT GAGCTACAGC TATGTCGCGC CGCTCGCCGA TCCGGCGGTG
CTCGGCAAGC TGCCCGCGTG GCTCGCGAGG CGCGACTCGG CGCTGCGCTT CGTGCCGCGG
CTCGACGTCG ATCAATGGCT GTGGTGCGCC GCGTTCCTCG CCGCGTGCCG CACCGCCCGC
GCACGGCGCA CCGCAGCCGA GATGCTCGAG CTCGGCGCGC TCAGCCGCAT CGCGCTGCAC
GCGCTCGTCG AGCGGGAAAC GCTCGATTTC GATTATGCGC GCAACGGCAA GCTCGTCGTG
TACCGCGACC GGCGGGAATT CGACCGCGCG CGCCGCGCGA TGGACCATCT GATCGCGGCC
GGCGCACGGC AGCAGGCGCT TGACACGGCT GCATGCGTCG CGCTGGAACC CGCGCTCGCG
CCCGCGTCGG GCCTGCTCGC GGGCGGCATT CATACGCCGT CCGAAGAAGT CGGCGATTGC
CGCCGCTTCG GCATCGAGCT CGCCCGCGTG CTGCGCGAGC GGCTTCGCGT CGCGATCCAC
TACGAAACGC CCGTTGATAC GCTGCGCACC GAAGGCGCGA CGATCGTCGC GGCGCGCACC
CCGCGCGGCG AGATCGCCGC CGACGCGTTC GTGCTGTCCG CCGGCAACGG CAGCGCGCCG
ATGCTGCGCC GGCTCGGCAT GCGGCTGCCG ATCTATCCGC TGACGGGCTA CAGCCTGACC
TTGCCCGCCC GGCACGACGC GACGCCGCGC GTGAGCGTGA CGGACCTGCA TCGCAAGATC
GTCTATGCGC CGCTCGGCGC GCGCCTGCGG ATCGCGGGCA TGGTCGAGAT CGCCGGCCTG
CGTTCGTCCG GCGCCGCGCG CCGGCTCGCC TTGCTCGCGC AACAGGCGCA AGAGATCTTT
CCGCATGCGG GCGACTACGC GCACGGCGAA ACGTGGTGCG GCCATCGCCC CGCGACGCCC
GACGGCAAGC CGCTGATCGG CGCGACGCCG TTCCGGAATC TGTGGCTCAA CACCGGCCAC
GGCGCGCTCG GCTTCACGCT CGCCTGCGGC AGCGCCCGCG TGCTCGCCGA TCTGATCGCG
GGCCGCCCGC CCGCGCTGGA CACCCGCGCG TATGCATTGC ATCGTTGA
 
Protein sequence
MRICVLGAGV VGLTSAYCLA REGHDVTVLE ARPDAVLDAS FANGGQLSYS YVAPLADPAV 
LGKLPAWLAR RDSALRFVPR LDVDQWLWCA AFLAACRTAR ARRTAAEMLE LGALSRIALH
ALVERETLDF DYARNGKLVV YRDRREFDRA RRAMDHLIAA GARQQALDTA ACVALEPALA
PASGLLAGGI HTPSEEVGDC RRFGIELARV LRERLRVAIH YETPVDTLRT EGATIVAART
PRGEIAADAF VLSAGNGSAP MLRRLGMRLP IYPLTGYSLT LPARHDATPR VSVTDLHRKI
VYAPLGARLR IAGMVEIAGL RSSGAARRLA LLAQQAQEIF PHAGDYAHGE TWCGHRPATP
DGKPLIGATP FRNLWLNTGH GALGFTLACG SARVLADLIA GRPPALDTRA YALHR