Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA1871 |
Symbol | prpR |
ID | 3087986 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | + |
Start bp | 2046773 |
End bp | 2048857 |
Gene Length | 2085 bp |
Protein Length | 694 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637565743 |
Product | propionate catabolism operon regulatory protein |
Protein accession | YP_106413 |
Protein GI | 53716047 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR02329] propionate catabolism operon regulatory protein PrpR |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCACCC TACCCGAAAC CGGCGTGCGG CCGCGCGTCT GGGCGGTCGG CATCAGCCGG CTGCGCGCGC TCTTTCGCGA CATCGCCGAC GAATACGAAG AACGCGCCGA TCTGCGGATC GTCGCGCGCG GCTACGAGGA GGCGATCACG GCGCTCGCGA CGGCGGGCGC CGAGCGCCCC GACGCGATCG TCGCCGCCGG CTCGAACGGC ACCTATCTGA AGGCGCGCGT GCGCGTGCCC GTCGTGCTCG TCAATCCGAC CGGCTTCGAC GTGATGCACG CGCTCGCGCG GGCGCGGCGC GATGCGGGCC GGATCGCGCT CGTCAGCTAC GGCGAGACGC CGCCCGAGGT GCGCAGTTTC GCGGCCGCGT ACGGGCTCGA CGTCGTGTTC GCGTCGTACC AGAGCGCGCA GGAGGCGGAC ACGCGCGTGC TCGAGATGCG CGAGCGCGGC ATCGAGACCG TCGTCGGGCC GGGGCTCGTC ACCGATCTCG CGGCGAACGC CGGGATGGGC GCGGTGTTCG TCTATTCGCA CGCGTCGGTG CGCGCCGCCG TGAACACCGC GCTCGAGGTC GCGCACGCGA CGCACGCGGA AGCGCTGCGC CGCGAGCGCC TCGACAACCT GCTGCAGCAC CTGCGCGACG GCGTGGTGGC GCTCGACCGC GAGGGCCGCA TCGAGGCGAT CAACGAGCGG CTCGCGCTCG CGCTCGGCGT ATCGCCGTCG GCCGCGGTGG GCCGCGCGCT GGACGATCTG ACGCCCGAGC TGCGCACGCT GCGCGCGGCC GACGGCGACA CGCTCGCGAC GGTGCGCGGC GTGCGCTACG TCGTGCATCG CGGGCCGCTC GCCGCGAGCG GCGGCGCGCC CGGCAGCGTG CTGACGTTCC AAGAATCGCG TGCGGTCGAG CGGCTCGACC GCACGCTGCG CTCGCATCAG CACGCGCAGC AGTTCACCGC GCGCTACCGG CTCGACGACA TCGTCGGCAC GACGCCCGCG ATCGCGTACG CGCGCGACCT CGCGCGGCGC TACGCGAAAT CGGACGCGAC CGTGCTGATC CTCGGCGAGA GCGGCACCGG CAAGGAGATG ATCGCGCAGA GCCTGCACGC GCTGTCCGCA CGCCGCAAGT ATCCGTTCGT CGCGGTCAAC TGCGGCGCGT TTCCGGAATC GCTGCTCGAG AGCGAGCTGT TCGGCTACGA GGAAGGCGCG TTCACCGGCG CGCGGCGCGG CGGCAAGGCG GGGCTGTTCG AGGCCGCGCA CCGCGGCACG CTGTTTCTCG ACGAGATCGG CGAAATGCCC CCGTCGCTGC AAAGCCGGCT GCTGCGCGTG CTGCAGGAGC GCGAGGTCGT GCGCGTCGGC TCGACCGAGC CGGTTCCGGT CGACATCCGC GTCGTCGCCG CGACGCACCG GCCGCTCTTC GCCGCCGTCG AGGCGGGCAC GTTCCGCGCG GATCTCTATT ACCGGCTGAA CATCCTGAAC ATCGGGCTGC CGCCGCTGCG CGAGCGCGCG GCCGACATTC CGGCGCTCGC CGCGACGCTG CTCGCGCAGG CCGCGCGCCG CGAGCCGCGG CTCGCCGAGC GGCTGCGCGA CGCCAACGAT GCGGCGCGCG CGCTCGACGC GGCGAACGCC GCGCTCGCCC GCTATCGATG GCCGGGCAAC GTGCGCGAAT TGCAGAACGT GATCGAGCGC ATCGCCGTCG AGCTCGCCGA CGCGGGCGAG CGCGGCGATG CGGCCGTGAG CGCCGACACG CTGCGCGCGA TCGCGCCCGA GGTGTTCGCG CTCGATACGC TCGGCGGGTT CGGCTCGTTC GGCTCGGCGG CGGGCGGCGG GCACGGCGAC GCGAGCGGCG GAGATATCGA TGCCGATGCC GACGCGCGAC GCCCGACGCT CGTGCAGCGC CGCCGGCGCG CGGAAGCCGA CGAGATTCGC GCGGCGCTCG ACGCATGCGG CGGCGACCGC GACCGCGCGT GCGCGAGGCT CGGCATCAGC AAGACGACGC TGTGGCGCAA GCTCGCGGCG AGCGAAGGGA AAGCGCGAGG CAATAAGCGC GGCGGCGGCC ACGGCGGCGA CAACGACGAA GGCGCGGGTG CGTGA
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Protein sequence | MSTLPETGVR PRVWAVGISR LRALFRDIAD EYEERADLRI VARGYEEAIT ALATAGAERP DAIVAAGSNG TYLKARVRVP VVLVNPTGFD VMHALARARR DAGRIALVSY GETPPEVRSF AAAYGLDVVF ASYQSAQEAD TRVLEMRERG IETVVGPGLV TDLAANAGMG AVFVYSHASV RAAVNTALEV AHATHAEALR RERLDNLLQH LRDGVVALDR EGRIEAINER LALALGVSPS AAVGRALDDL TPELRTLRAA DGDTLATVRG VRYVVHRGPL AASGGAPGSV LTFQESRAVE RLDRTLRSHQ HAQQFTARYR LDDIVGTTPA IAYARDLARR YAKSDATVLI LGESGTGKEM IAQSLHALSA RRKYPFVAVN CGAFPESLLE SELFGYEEGA FTGARRGGKA GLFEAAHRGT LFLDEIGEMP PSLQSRLLRV LQEREVVRVG STEPVPVDIR VVAATHRPLF AAVEAGTFRA DLYYRLNILN IGLPPLRERA ADIPALAATL LAQAARREPR LAERLRDAND AARALDAANA ALARYRWPGN VRELQNVIER IAVELADAGE RGDAAVSADT LRAIAPEVFA LDTLGGFGSF GSAAGGGHGD ASGGDIDADA DARRPTLVQR RRRAEADEIR AALDACGGDR DRACARLGIS KTTLWRKLAA SEGKARGNKR GGGHGGDNDE GAGA
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