Gene BMAA1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1840 
Symbol 
ID3087364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand- 
Start bp2008163 
End bp2009233 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content70% 
IMG OID637565715 
Productsqualene/phytoene synthase family protein 
Protein accessionYP_106390 
Protein GI53716226 
COG category[I] Lipid transport and metabolism 
COG ID[COG1562] Phytoene/squalene synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.156378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC TGATCCGATC CATGGGCAAT TCCACCCGGG CCTTTCTGCT GGGCCCCCTG 
CTGAAGGGCG TGTCGCGCTC CTTCTATCTG ACGTTGCGCG TGCTGCCGCA AGGCATGCGC 
GACCCGATCG GCCTTGCGTA TCTGCTCGCG CGCGCGGCCG ACACGATCGC CGACACGTCG 
CTGATCCCGC CCGCTCAGCG GCTCGAACTG CTGCTGTCGC TGCGCGCGCA GATCAACGGC 
GCGCCCGATC CGCACGCGCT CGCGCGGATC GCGGGCGAGG TCGCGGGGCA GCAGGCGCAG 
ACGGACGAGA AGACGCTGCT CGAATCGCTT GGCCCCGCGC TCGCGGTGCT GTCGCAATTG 
AGCGCGCCCG ATCGCGCCGC GGTGCGCGGC GTCGTCACCA CGCTCACCGA AGGGATGGAA 
TTCGATTTGC GCACGTTCCC GGACGAATCG TCGGGCCGCA TCGTCGCGCT GCGGGAATGG 
CCGGCGCTCG ATCGCTATAC GTATCTCGTT GCCGGCTGCG TCGGCGAATT CTGGACGAAG 
ATGACGTGCG CGCATCTGCC CGGGCTGCTG ACCGAGCGGG AGGACACGAT GAGCGAGCGC 
GGCATCCGCT TCGGCAAGGC GCTGCAGATG ACCAACGTGC TGCGCGACTG CGGCAGGGAC 
CTGCGGATCG GCCGCTGCTA TCTGCCGCAG GCGATGCTGG ACGAATACGG GCTGCGCGCG 
GAGGATCTGC TGGGGCCGGA CGCTTCGCTG CGCGTACGGC CGCTGATGCA TGCGCTCGTG 
CGCACGACGC TCGCGCATTT TCGCGCGGGC ATCGATTATA CGTTCGCGAT TCCGCGCCGC 
GCGCCGCGCC TGCGGCTTGC CTGTTTCTGG CCGATCGCGA TCGGCCTGCG GACGCTCGCG 
CTGCTCGCGT CGAACGACGC GTGGCTCGAT CCGGCGCGCG CGTCGAAGGT GCGGCGCGGC 
GACGTCTACC GGATCCTCGC GTATTCGCTG CCGCTCGCGA TGTCGAACGG CGCGCTGCGC 
GCGTGGCTCG ACCGCCTGAT CGCGGACGTC GAGGCGCGGC TCATCGCGTG A
 
Protein sequence
MTDLIRSMGN STRAFLLGPL LKGVSRSFYL TLRVLPQGMR DPIGLAYLLA RAADTIADTS 
LIPPAQRLEL LLSLRAQING APDPHALARI AGEVAGQQAQ TDEKTLLESL GPALAVLSQL 
SAPDRAAVRG VVTTLTEGME FDLRTFPDES SGRIVALREW PALDRYTYLV AGCVGEFWTK 
MTCAHLPGLL TEREDTMSER GIRFGKALQM TNVLRDCGRD LRIGRCYLPQ AMLDEYGLRA 
EDLLGPDASL RVRPLMHALV RTTLAHFRAG IDYTFAIPRR APRLRLACFW PIAIGLRTLA 
LLASNDAWLD PARASKVRRG DVYRILAYSL PLAMSNGALR AWLDRLIADV EARLIA