Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA1754 |
Symbol | prpD |
ID | 3086936 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | + |
Start bp | 1912079 |
End bp | 1913530 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637565631 |
Product | 2-methylcitrate dehydratase |
Protein accession | YP_106313 |
Protein GI | 53716123 |
COG category | [R] General function prediction only |
COG ID | [COG2079] Uncharacterized protein involved in propionate catabolism |
TIGRFAM ID | [TIGR02330] 2-methylcitrate dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.723906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCGCCC CTATCCCGAA CGTCCGGCCA GCGCCGGATT CAGTGCTGGT CGAGATCGCC GACTACGCGC TGAACCATCG CATCGACAGT GCGCTCGCGC TCGAAACCGC GCGCCACTGC CTGATCGATA CGCTCGGGTG CGGGCTCGAG GCGCTGTCGT ATCCCGCCTG CACCAAGCTG CTCGGGCCGA TCGTGCCCGG CACGATCGTG CCGCACGGCG CGAAGGTGCC GGGCACGTCG CTGCAGCTCG ACCCGGTGCA GGCCGCGTTC AACATCGGCG CGGCGATCCG CTGGCTCGAC TTCAACGACA CGTGGCTCGC GGCCGAATGG GGCCATCCTT CGGACAACCT GGGCGGCATC CTCGCGACGG CCGACTGGCT CTCGCGCACC GCCGTCGCGT CCGGCAAGCG GCCGCTCGCG ATGAAGGACG TGCTCGTCGC GATGATCCAT GCGCATGAGA TCCAGGGCTG CCTCGCGCTC GAAAATTCGT TCAATGCGGT CGGCCTCGAT CACGTGCTGC TCGTGAAGGT CGCCTCGACC GCGACCGTCG GCTGCCTGCT CGGCCTCACG CGCGACGAGC TGATCAACGC GCTGTCGCTC GCGTTCGTCG ACGGCCAGGC GCTGCGCACC TATCGCCACG CGCCGAACAC CGGCTCGCGC AAGTCGTGGG CGGCGGGCGA CGCGACCTCG CGCGCGGTGC GCCTCGCGCT GATCGCGAAA ACGGGCGAGA TGGGCTACCC GCGCGCGCTC ACCGCGAAAA CCTGGGGCTT CTACGACGTG TCGTTCGGCG GCAAGCCGTT CCGCTTCCAG CGCCCATACG GCACCTACGT GATGGAGAAC GTGCTGTTCA AGCTCTCGTA TCCGGCCGAA TTCCACGCGC AGACGGCCGT CGAAGCCGCG ATGACGCTGC ACGCGCGGCT CGCGGCGGCC GGGCGCACCG CCGACGAGAT CCGCCGCGTC ACCGTGCGCA CGCATGCGGC CGCGATGCGC ATCATCGACA AGCAAGGGCC GCTCGCGAAC CCGGCCGACC GCGATCACTG CATCCAGTAC ATGATCGCCG TGCCGCTCCT GTTCGGCCGC CTCACGGCCG CCGACTACGA GGACGCGGTG GCGGCCGATC CGCGGATCGA CGCGCTGCGC GCGAAGATCG CGTGCGTCGA GGACCCGCAG TTCACGCAGG ATTATCACGA CCCGGCGAAG CGCTCGATCG CCAATGCGCT CACGATCGAG TTCGACGACG GATCGACGCT CGCCGAGGTG GCGGTCGAAT ACCCGATCGG CCACATGCGC CGGCGCGCCG AAGGGATGGC GCTCCTGATC GACAAGTTCA GGACGAATCT CGCGCGCCGC TTTCCGGCCA AGCAGCAACA AGCGATTCTC GACGTGTCGC TGGACCAGGC AAAGCTCGAA GCGATGCCGG TCGATGAGTA CGTCGATCTG TATGTGATCT AG
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Protein sequence | MSAPIPNVRP APDSVLVEIA DYALNHRIDS ALALETARHC LIDTLGCGLE ALSYPACTKL LGPIVPGTIV PHGAKVPGTS LQLDPVQAAF NIGAAIRWLD FNDTWLAAEW GHPSDNLGGI LATADWLSRT AVASGKRPLA MKDVLVAMIH AHEIQGCLAL ENSFNAVGLD HVLLVKVAST ATVGCLLGLT RDELINALSL AFVDGQALRT YRHAPNTGSR KSWAAGDATS RAVRLALIAK TGEMGYPRAL TAKTWGFYDV SFGGKPFRFQ RPYGTYVMEN VLFKLSYPAE FHAQTAVEAA MTLHARLAAA GRTADEIRRV TVRTHAAAMR IIDKQGPLAN PADRDHCIQY MIAVPLLFGR LTAADYEDAV AADPRIDALR AKIACVEDPQ FTQDYHDPAK RSIANALTIE FDDGSTLAEV AVEYPIGHMR RRAEGMALLI DKFRTNLARR FPAKQQQAIL DVSLDQAKLE AMPVDEYVDL YVI
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