Gene BMAA1723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1723 
SymboltruA 
ID3086994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1882594 
End bp1883406 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content68% 
IMG OID637565600 
ProducttRNA pseudouridine synthase A 
Protein accessionYP_106286 
Protein GI53716174 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0101] Pseudouridylate synthase 
TIGRFAM ID[TIGR00071] pseudouridylate synthase I 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAATCG CACTCGGCAT TCAGTACGAC GGCGCGGCGT TCTGCGGCTG GCAGTCGCAG 
CCCCACGGCA AGACGGTTCA GGACGCGCTC GAGCGCTCGC TCGCGGAATT CGCGCAGACG
TCGCTGCACA CGACGGTCGC GGGCCGCACC GACACCGGCG TGCACGGCCT CGGCCAGGTC
GTCCATTTCG ATACCGACCT CGACCGCGCG GATTTCTCAT GGGTGCGCGG CACGAACGCG
TTCCTGCCGC CGACGGTCGC CGTGCAGTGG GCGAAGCCGA TGCCGGATAC GTTCCACGCG
CGCTTCGCCG CTTTCGAGCG CACCTACTAC TACGCGCTGT ACGTGCATCC GGTGCGCTCG
CCGATGCTCG CGGGGCGCGC GGGGTGGGTC CACACGCCGC TCGACGTCGA CGCAATGCGC
GAAGCGGCCG CGCATCTCGT CGGCGAGCAC GATTTCTCGG CGTTTCGCTC GTCCGAGTGC
CAGGCGAAAT CGCCCGTCAA GCATCTGTAC CAGATCGGCA TCCGCCCCGA CGGCGATTTC
ATCCACTTCC GCTTCCGCGC GAACGCGTTC CTGCACCACA TGGTGCGCAA TCTGATGGGC
TGCCTCGTCG CGGTGGGGCG CGGCCGCTAT CCGTCGTCGT GGCTCGCCGA AGTGCTGGAG
AGCCGCGATC GCGATTGCGC GGCGCCGACT TTCATGCCCG AAGGGCTCTA TCTCGCGCAC
GTCGGCTATC CGGCCGAATT CGCGGTGCCG CCCGCACAGC TCGGCAGCGT GCCGTGGAGC
AGCGTGTGGG CCGATCTGGA CGGACGAACA TGA
 
Protein sequence
MRIALGIQYD GAAFCGWQSQ PHGKTVQDAL ERSLAEFAQT SLHTTVAGRT DTGVHGLGQV 
VHFDTDLDRA DFSWVRGTNA FLPPTVAVQW AKPMPDTFHA RFAAFERTYY YALYVHPVRS
PMLAGRAGWV HTPLDVDAMR EAAAHLVGEH DFSAFRSSEC QAKSPVKHLY QIGIRPDGDF
IHFRFRANAF LHHMVRNLMG CLVAVGRGRY PSSWLAEVLE SRDRDCAAPT FMPEGLYLAH
VGYPAEFAVP PAQLGSVPWS SVWADLDGRT