Gene BMAA1678 details

Gene Information

• Locus tag: BMAA1678
• Symbol: selB
• ID: 3086826
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006349
• Strand: -
• Start bp: 1830221
• End bp: 1832146
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637565557
• Product: selenocysteine-specific translation elongation factor
• Protein accession: YP_106245
• Protein GI: 53716347
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCGTCG GGACCGCAGG CCACATCGAT CACGGCAAGA CGACGCTTGT GCGCGCGCTG 
ACGGGCGTCG ACACCGATCG GCTGAAGGAA GAGAAGGCGC GCGGAATCTC GATCGAGCTC 
GGCTACGCGT ACACGCCGCT GCCGAACGGC GACGTGCTCG GCTTCATCGA CGTGCCCGGC 
CATGAAAAGC TCGTCCACAC GATGGCCGCG GGCGCGTGCG GGATCGACTT CGCGCTCGTC 
GTGATCGCGG CCGACGACGG CGTGATGCCG CAGACCCGCG AACATCTGTC GATTCTGCAA 
CTGCTGGGCG TCGCGCATGG CGCGCTCGCG CTGACGAAAT GCGATCGCGT CGACGCGGCG 
CGCGTCGCGC GGGTGCGCGA CGAGATCCGC GCGTGGCTCG CGGCCTCGCC GCTCGCCGAT 
GCGCCGGTTT TCGAGACGCG CGCGAGCGAG CCGGACGACG CGGGCGTTGC CGCATTGAAC 
GCGCACCTGC GCGACACGGC GCTCGCCTGG CGCGCGCGGC GCGACGACGG CCTGTTCCGG 
CTCGCGGTCG ATCGCGTGTT CACGCTCGCG GGGCAAGGCA CCGTCGTGAC GGGCACCGCG 
GTCGCGGGGC GCGTGCGCAC GGGCGACTCG CTCGCCGTCG CGCGCACGGG CGAAACGGTG 
CGCGTGCGCA GCATCCATGC GCAGAACCGC GCGACCGACG TCGGCCATGC GGGCGAGCGC 
TGCGCGCTGA ATCTCGCGGG CATCGACAAG GCGGCGCTCG CGCGCGGCGA TGCGATCGTC 
GACGCGCGGC TCGCGACGCT TTCGCCACGC ATCGACGTCG AATTGACGTT GACGGCGGAC 
GCCGACCTGA CGATCTCGCA CTGGACGCCG CTGCACGTGC ATCTCGGCAC GCTGCACCGG 
GTCGCGCACG TTGCGCTGCT CGAAGGCGAG ACGCTCGGGC CCGGCCGGCG CGCCCGCGCG 
CAGTTGAATT TCACGGAGCC GGTGTTCGCC GCGCCGGGCG ATCGCTTCAT CGTGCGCGAC 
GCGCAGGCGA CGCGCACCGT GGGCGGCGGG CGCGTGCTCG ATCCGTTCGG CCCCGCGCGC 
AAGCGGCGCA CGCGCGCGCG ACGCGCGTGG CTCGACGCGC TCGCGGCGTG GCTCGACGAA 
GGCCGTCTCG ACGCGTTGCT CGACGAGGCG CCGCTCGGCA TCGCGCGCGC GACGCTGATG 
CATCTGACCG GCTTGCCGGC GCAGGCGTGG GCGTTGCCGG CCGATGCGGT GAGCGTCGCC 
GCGCCGGGCA AGCACGCGGA CGAAGCGCGC GTGCTTGCGC GCGGGCATTG GGACGCGCTG 
CGCACGCGCG TGCTCGATGC GCTCGCGGCA TTCCATCAGC GCTCGCCGGA CGAGCAGGGG 
CCGGATGTCG CGCGGCTGCG CCGGATCGCC GCGCCGCTCG CGGACGACGC GTTGTGGCGC 
GCGCTGACCG ATGCGCTGAT CGCCGAGGGC GCGATCGTGC GCAGCGGCCC GTGGCTGCAT 
TTGCCGTCGC ATGCGGTGAG CTTCGACGCG GCCGAAGAGG CGTTGGCCGG GCGCTTGCTG 
CCGCTCGTCG CGGCGGGCCG CTACGATCCG CCGTGGGTGC GCGATCACGC GGCGGCGACG 
CTCATGGCGG AGGACGCGGT GCGCGCGCTG CTGCGCAAGC TCGCGCGGCG CGGCGACGTG 
CATCAGGTCG TGCGGGATCT GTTCTATCAC CGCGACGTGA TCGCGGAGCT TGCGCGACTG 
ATCGCGCGAC TCGCGGGCGA GCACGGCGGC GGGCTCGATG CGGCGACGTT TCGCGACGCG 
ACCGGGCTCG GCCGCAAGCG GGCGATTCAA ATTCTCGAGT TCTTCGATCG CGTTGGGTAT 
ACTCGCTTCC ACCGCGACCT GCACTGGTTG CGGGCTGATA GCCGGTTGCT GGCCGGCTCG 
CGGTAG 

 

Protein sequence

MIVGTAGHID HGKTTLVRAL TGVDTDRLKE EKARGISIEL GYAYTPLPNG DVLGFIDVPG 
HEKLVHTMAA GACGIDFALV VIAADDGVMP QTREHLSILQ LLGVAHGALA LTKCDRVDAA 
RVARVRDEIR AWLAASPLAD APVFETRASE PDDAGVAALN AHLRDTALAW RARRDDGLFR 
LAVDRVFTLA GQGTVVTGTA VAGRVRTGDS LAVARTGETV RVRSIHAQNR ATDVGHAGER 
CALNLAGIDK AALARGDAIV DARLATLSPR IDVELTLTAD ADLTISHWTP LHVHLGTLHR 
VAHVALLEGE TLGPGRRARA QLNFTEPVFA APGDRFIVRD AQATRTVGGG RVLDPFGPAR 
KRRTRARRAW LDALAAWLDE GRLDALLDEA PLGIARATLM HLTGLPAQAW ALPADAVSVA 
APGKHADEAR VLARGHWDAL RTRVLDALAA FHQRSPDEQG PDVARLRRIA APLADDALWR 
ALTDALIAEG AIVRSGPWLH LPSHAVSFDA AEEALAGRLL PLVAAGRYDP PWVRDHAAAT 
LMAEDAVRAL LRKLARRGDV HQVVRDLFYH RDVIAELARL IARLAGEHGG GLDAATFRDA 
TGLGRKRAIQ ILEFFDRVGY TRFHRDLHWL RADSRLLAGS R