| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA1637 |
|---|
| Symbol | sctN |
|---|
| ID | 3087049 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | + |
|---|
| Start bp | 1774423 |
|---|
| End bp | 1775712 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 637565519 |
|---|
| Product | type III secretion system ATPase |
|---|
| Protein accession | YP_106211 |
|---|
| Protein GI | 53716417 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1157] Flagellar biosynthesis/type III secretory pathway ATPase |
|---|
| TIGRFAM ID | [TIGR01026] ATPase FliI/YscN family
[TIGR02546] type III secretion apparatus H+-transporting two-sector ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.907446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCC GACTCGCGAT CGAGCCCGCC GTCGGCATGA CCGGCAAGGT GCTCGAAGTG
ATCGGCACGC TCGTGCGCGT GGTCGGCCTC GAAGCGACGC TCGGCGAGCT CTGCGAGCTG
CGCGGCGCGT CGGGCGCGCT GATCCAGCAT GCGGAAGTCG TCGGCTTCAC GCGCAACGTC
GCGCTGCTGT CGCCGTTCGG CACGCTCGGC GAGATCAATC GCGGCACGCG CGTGATCGGC
CTGCGGCGGC CGCTGTCGGT GAAGGTCGGC AACGGCATCC TCGGGCGCGT GATCGACAGC
TTCGGCGAGC CGATCGACGG GCGCGGCGAG CTCGACTACG ACGCGCTGCG CCCCGTGATC
GCGGCGCCGC CGAACCCGAT GTCGCGGCGC ATGGTCGACG CCTCGCTCGC GACCGGCGTG
CGCATCGTCG ACGGCCTGAT CACGCTCGGC GAAGGCCAGC GCATGGGGAT CTTCGCGCCC
GCCGGCGTCG GCAAGAGCAC GCTGCTCGGC ATGTTCGCGC GCGGCGCGTC GTGCGACGTC
AACGTGATCG CGCTGATCGG CGAGCGCGGC CGCGAGGTGC GCGAGTTCGT CGAGCTGATC
ATGGGCGAGG ACGGGATGGC GCGCTCGGTC GTCGTGTGCG CGACGTCCGA CCGCTCGTCG
ATCGAACGCG CGAAGGCCGC GTACGCGGCG ACCGCGATCG CCGAGTACTT CCGCGACCAG
GGCAAGCGCG TGCTGCTGAT GATGGATTCG CTCACGCGCT TCGCGCGCGC CGGCCGCGAG
ATCGGCCTCG CGGCCGGCGA GCCGCCCGCG CGGCGCGGCT TCCCGCCTTC CGTGTTCGCC
GAGCTGCCGC GCCTGCTCGA GCGCACCGGG ATGGGCGAGC ACGGCTCGAT CACCGCGCTC
TACACGGTGC TCGCCGAGGA TGACTCCGGC AGCGATCCGA TCGCCGAGGA AGTGCGCGGC
ATTCTCGACG GCCACATCAT CCTGTCGCGC GAGATCGCCG CGCGCAACCA GTATCCGGCG
ATCGACGTGC TCGGCAGCCT GTCGCGGATC ATGCCGCAGG TCGCGACGCG CGAGCATGTC
GGCGCGGCCG GCCGGCTGCG CCAGTTGCTC GCGAAGCACC GCGAGATCGA GACGCTGTTG
CAGCTCGGCG AATACCAGGC GGGCAGCGAT CCGGCCGCCG ACGAGGCGGT CGCGAAGATC
GACCGGATCC GTGCGTTCCT CAACCAGCGC ACCGACGAAT ACTCGCCGCC CGACGCGACG
CTCGCCGCGC TACACGAGCT CGTCCGATGA
|
|---|
| Protein sequence | MAARLAIEPA VGMTGKVLEV IGTLVRVVGL EATLGELCEL RGASGALIQH AEVVGFTRNV
ALLSPFGTLG EINRGTRVIG LRRPLSVKVG NGILGRVIDS FGEPIDGRGE LDYDALRPVI
AAPPNPMSRR MVDASLATGV RIVDGLITLG EGQRMGIFAP AGVGKSTLLG MFARGASCDV
NVIALIGERG REVREFVELI MGEDGMARSV VVCATSDRSS IERAKAAYAA TAIAEYFRDQ
GKRVLLMMDS LTRFARAGRE IGLAAGEPPA RRGFPPSVFA ELPRLLERTG MGEHGSITAL
YTVLAEDDSG SDPIAEEVRG ILDGHIILSR EIAARNQYPA IDVLGSLSRI MPQVATREHV
GAAGRLRQLL AKHREIETLL QLGEYQAGSD PAADEAVAKI DRIRAFLNQR TDEYSPPDAT
LAALHELVR
|
|---|
| |