| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA1627 |
|---|
| Symbol | sctS |
|---|
| ID | 3086778 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | - |
|---|
| Start bp | 1764896 |
|---|
| End bp | 1765159 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637565510 |
|---|
| Product | type III secretion inner membrane protein SctS |
|---|
| Protein accession | YP_106202 |
|---|
| Protein GI | 53716434 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4794] Type III secretory pathway, component EscS |
|---|
| TIGRFAM ID | [TIGR01403] type III secretion protein, HrpO family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.878926 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATCG ACGACCTGAT CCGGCTCACG TCGCAAGGCA TGATGCTGTG TCTCTACATC
TCGCTGCCGG TCGTACTCGT CGCGGCCGCC TCCGGCCTGG CGATCTCGTT CCTGCAGGCG
ATCACGTCGC TGCAGGAGCA GAGCATCTCG TACGGCGTGA AGCTCGTCGC GGTGACGGTG
ACCGTCGCGA TCGCCGGGCC GTGGGCGGCC GCCGAGATCC TGCATTTCGC GCAGCAACTG
ATGTCCGCGG CGGTGCCGTC GTGA
|
|---|
| Protein sequence | MEIDDLIRLT SQGMMLCLYI SLPVVLVAAA SGLAISFLQA ITSLQEQSIS YGVKLVAVTV
TVAIAGPWAA AEILHFAQQL MSAAVPS
|
|---|
| |