| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA1589 |
|---|
| Symbol | bcsC |
|---|
| ID | 3086321 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | - |
|---|
| Start bp | 1723566 |
|---|
| End bp | 1725110 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 637565473 |
|---|
| Product | endo-1,4-D-glucanase |
|---|
| Protein accession | YP_106172 |
|---|
| Protein GI | 161579040 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3405] Endoglucanase Y |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.390235 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGGC AAGCGGGGCG AGACGAAGGC GTCGGGCGCA TCGGGCGCAT CGGGCGCATC
GGGCGTGAAG CGGGCGACGC GCGCGAGGCG GCCGGGGCGG GCGAGGCGTG CGGGAGGCGC
CACGCGCGGG CCGACGCGTG GGCGCGGCGG GCGTCGCGAG CATCGCGCGG GTGGCGCACG
TTTTGGCGCG GGGGCGGGCG TGGGCGCGTG CGCGCCGTCG TGGCGAGCGT CGTGGCGAGC
TTCTCGGTGA TGGCGTTCGC GGCGGCGACG TTGCCGGTGT CGTGGCGCGT CGCCGCGGCG
GCGGAGCGTA CGCGAAGCGG CGGCGAACGC GCGGGCGGGC TGCGCGACAC GGCGGGCTTG
ATCGAGATCT CGGCGGCGGC GCCGGCCTCG ACGCCGATCC CGGCGGCGCC GCGGCGGTTC
GCGCAGCCGT TCGCGCAGCC GGCTCGCGCG TTCGCCGTCG CGAGCGCCTG CGCGCCGTCC
TGGCCGCGCT GGGACCGTTT CAAGCGTGAC TTCGTATCGG CCGACGGCCG CGTGATCGAC
GTCGGCTCGG CCGACGAGCG GACCGTATCC GAGGGGCAGG CGTACGGCCT TTTCTTCGCG
CTCGTCGCGA ACGACCGCGC GGCGTTCGAC GCGCTGCTGC GCTGGACCGA GGACAATCTC
GCGCAGGGCG ATCTGAGCGC GCGTCTGCCC GCGTGGCTGT GGGGCCGCGC GGCCGACGGC
GCGTGGCGCG TGCTCGATGC GAACGCCGCG TCCGACGCCG ATCTGTGGCT TGCGTACGCG
CTGCTCGAAG CGGGGCGCTT GTGGCGCGAG CGCAGCTACA CGGCGCGCGG CGCGTTGCTC
GCGAAGCGCG TGCTCGACGA GGAGACCGCG ACGCTGCCGG GGCTCGGTCT CGTGCTGCTG
CCGGGCCCGA TGGGTTTTCG GCCGGCGCGC GACGCGTGGC GGCTGAATCC GAGCTATTCG
CCGCCGCAGG CGATTCGCGG GATCGGCGCG CATGTGCCCG ACGACGCGCG CTGGGCGCGG
CTCGCGGCGG GCGTCGGCCG CGTGCTGACC GACAGCGCGC CGCGCGGCTT CGCGCCGGAC
TGGGCGCTGT ATCGCGCGGG CCGCGGCTTC GAGCCGGACG CCGAAACGCA TGCGGTGAGC
GCGTACAACG CGATTCGCGT CTATCTGTGG GCGGGCATGC TCGATGCGGG CGATCCGCTG
GCGCGGCCGC TCGTCGCGCA TTTCGCGCCG TTCGCCGAGC ATGTCGCCGC GCATGGCGCG
CCGCCGGAGG CGGTCGATGC GACGACGGGC GCGGCCGCCC CGCGCGACGG CAATGCCGGG
TTTTCCGCGG CGGCCGTGCC GTTTCTCGAG GCGCGCGGCG AGCGGGCGAG CGCCGACGCG
CAGCTCGCGC GCGTCGCGCG GCTCGAGCGC GAGACGGCGA GCGGCTATTA CGCGAACGTG
CTGACGCTGT TCGGGCTCGG CTGGCGCGAC GGGCGCTACC GGTTCGCGGC CGACGGCACG
CTGCGGGTGC GATGGAGCGA GCCGTGCTCG ACGCCCGCGC GTTGA
|
|---|
| Protein sequence | MARQAGRDEG VGRIGRIGRI GREAGDAREA AGAGEACGRR HARADAWARR ASRASRGWRT
FWRGGGRGRV RAVVASVVAS FSVMAFAAAT LPVSWRVAAA AERTRSGGER AGGLRDTAGL
IEISAAAPAS TPIPAAPRRF AQPFAQPARA FAVASACAPS WPRWDRFKRD FVSADGRVID
VGSADERTVS EGQAYGLFFA LVANDRAAFD ALLRWTEDNL AQGDLSARLP AWLWGRAADG
AWRVLDANAA SDADLWLAYA LLEAGRLWRE RSYTARGALL AKRVLDEETA TLPGLGLVLL
PGPMGFRPAR DAWRLNPSYS PPQAIRGIGA HVPDDARWAR LAAGVGRVLT DSAPRGFAPD
WALYRAGRGF EPDAETHAVS AYNAIRVYLW AGMLDAGDPL ARPLVAHFAP FAEHVAAHGA
PPEAVDATTG AAAPRDGNAG FSAAAVPFLE ARGERASADA QLARVARLER ETASGYYANV
LTLFGLGWRD GRYRFAADGT LRVRWSEPCS TPAR
|
|---|
| |