| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA1576 |
|---|
| Symbol | |
|---|
| ID | 3087956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | + |
|---|
| Start bp | 1704646 |
|---|
| End bp | 1705338 |
|---|
| Gene Length | 693 bp |
|---|
| Protein Length | 230 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637565460 |
|---|
| Product | LuxR family transcriptional regulator |
|---|
| Protein accession | YP_106160 |
|---|
| Protein GI | 53716260 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.893939 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCCG CCGCGTTGCC GGAATCGCGC GACGTCCGCA CGCTGGTCGA GACTTTCAGG
CAGGCGGCGC TGCAGATCGG CTACCAGCAC CATGCGATCG TCGAGCTGTC GGGCGCATCG
CATCCGGCGT CGATCGACGT CGTCTCGCTG CACTATCCGT CCGAGTGGGT CGAGCACTAC
ACCCGCAACG ACTACTTCGC GATCGATCCC GTCCATCGCG CGGCATTCCG CTACAGCACG
CCGTTCTCGT GGAACGACGT CGCGACGGCG AACCTGCGCG AGCGGCATCT GCTGATGGAA
GCCGAGGACG CGGGCCTCGA CAACGGCATC AGCATCCCGC TGCATCAGCC GCTCGGACGC
GTGCTGCTGG TGAGCCTGTC CGGCACCGCG CCGACGCACG ATGCCGATGC GAAATGGCGC
AACGCGTACC TGCTCGGCAT GCAGTTCAAT CTGCAGTTCC AGAGCATGCG CACGTGCCGC
CCGATTCCGC CGTCCGTCCA CCTGACGGAT CGCGAACAGA TGTGCCTCAC GTGGGTCGCG
CGCGGCAAGT CGTCGTGGGT CATCGCGAAC ATGCTCGACA TCTCCAAATA CACGGTCGAC
TTCCACATCG AGAACGCGAT GGAGAAGCTC AACACGCGCA GCCGCACGTT CGCCGCCGTG
AAGGCGACGC GGCAGGGGCT CATCTTTCCA TGA
|
|---|
| Protein sequence | MLSAALPESR DVRTLVETFR QAALQIGYQH HAIVELSGAS HPASIDVVSL HYPSEWVEHY
TRNDYFAIDP VHRAAFRYST PFSWNDVATA NLRERHLLME AEDAGLDNGI SIPLHQPLGR
VLLVSLSGTA PTHDADAKWR NAYLLGMQFN LQFQSMRTCR PIPPSVHLTD REQMCLTWVA
RGKSSWVIAN MLDISKYTVD FHIENAMEKL NTRSRTFAAV KATRQGLIFP
|
|---|
| |