Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA1550 |
Symbol | basJ |
ID | 3087369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | + |
Start bp | 1678034 |
End bp | 1678984 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637565434 |
Product | type III secretion system BasJ |
Protein accession | YP_106138 |
Protein GI | 53716312 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4669] Type III secretory pathway, lipoprotein EscJ |
TIGRFAM ID | [TIGR02544] type III secretion apparatus lipoprotein, YscJ/HrcJ family |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAT TCGTCTCTTT CTCGCTGCTG CCGGCGCTGC TGCTGCTCGC CGCATGCAAC CAGCAGGAGT TGCTGAAGAA CCTGACCGAG CAGCAGGCGA ACGACGTCGT CGCGGTGCTC CAGGCGCACG ATCTCGCCGT GCGCAAGGAG GACCTCGGCA AGACCGGCTA TGCGGTGAGC GTCGAGCAGG CCGACTTTCC GACCGCCGTC GATCTGCTGC GGCAATACAA CCTGCCGTCG CAGGCGCGCG TGCAGATCGC GCAGGCGTTT CCCGCCGACT CGCTCGTCGC GTCGCCGCAG GCCGAGCAGG CGAGGTTGCT GTCGGCCGTC GAGCAGCGCC TCGAGCAGAA TCTCGCCGCG CTGCAGAACG TCGTGAGCGC GCGCGTGCAG GTGAGCTATC CGCTCAAGCC CTCCGACAGC GGCAAGCCAG ACGCGCGGAT GCACGTGGCC GCCCTGCTCA CCTATCGCAA CGACGTGAAC GCGGACATCC TCGTGAGCGA AGTGAAGCGG TTCGTGAAGA ACAGCTTCAC GAACATCGAT TACGACGACA TCTCGGTGAT CCTGTATCGC GCGCCGTCGC TGTTCCGAGG CGCACCGACG ATGCCCGCGT CGCATGCGGG CGGCGCGTGG CTCGCCTGGC TCGCGGCGAT TCCGGTCGCG CTCGCGGCCG CCGCCGCGGG CGGGCTCGCC TACCTGCGCC GCCGGCGCGC CGGCGGCCCC GATACGCCGG CTCGCGCGGC GCCGCGCGCC GAACCCGCGG CGCCGGCCGG CCCCGATGCA CGCGAGACGA CCGAGGTGCC GCCCCCGGGT GACGCATTCG ACATATCCGA TGCATCGGAC GCCTTCGATG CATCCGGCAC GTCCGCCTCG CCCGGCGCGT CGGCCGCGGA CGCCGCTGCG GCCGACGCGC CGGGCGCATC GCGCGGCGCG CCGTGGGAGC CGCGCCGATG A
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Protein sequence | MKRFVSFSLL PALLLLAACN QQELLKNLTE QQANDVVAVL QAHDLAVRKE DLGKTGYAVS VEQADFPTAV DLLRQYNLPS QARVQIAQAF PADSLVASPQ AEQARLLSAV EQRLEQNLAA LQNVVSARVQ VSYPLKPSDS GKPDARMHVA ALLTYRNDVN ADILVSEVKR FVKNSFTNID YDDISVILYR APSLFRGAPT MPASHAGGAW LAWLAAIPVA LAAAAAGGLA YLRRRRAGGP DTPARAAPRA EPAAPAGPDA RETTEVPPPG DAFDISDASD AFDASGTSAS PGASAADAAA ADAPGASRGA PWEPRR
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