Gene BMAA1544 details

Gene Information

• Locus tag: BMAA1544
• Symbol: bsaO
• ID: 3087750
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006349
• Strand: -
• Start bp: 1673077
• End bp: 1674897
• Gene Length: 1821 bp
• Protein Length: 606 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 637565428
• Product: type III secretion system protein BsaO
• Protein accession: YP_106133
• Protein GI: 53716325
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1450] Type II secretory pathway, component PulD
• TIGRFAM ID: [TIGR02516] type III secretion outer membrane pore, YscC/HrcC family

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.643588
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGGGCG CGGCATTCGC CGCGCCGACC GACGCGGCGC CGCTCGCCGA CGCGCCCGCG 
GCGGCGAGCG CGACGCCCGA CGCACGGGAC GGCGACGCGT CGCGCGTGGC CGCGCCGCCG 
GCGCGCGCGC CGCAGGACGA CGAGCGCCAC TTCGTCGCGA ACGACGCGAG CATCAGCGTG 
CTGCTCAATG CGCTGTCGGG CCGGCTGCAC AAGCCGATCG TCGCGAGCGA GAAGGTGCGC 
CGCAAGCACG TGACGGGCGA GTTCGACCTC GCGCAGCCCC GCGCGCTGCT CGCGCGGCTC 
GGCGAATCGA TGTCGCTGCT CTGGTACGAC GACGGCGCGT CGATCTACAT CTACGACAAC 
TCGGAGATCA AGAACGCGGT CGTCTCGATG CGCCATGCGA CGGTGCGCAA CCTGCGCAAT 
TTCATCCGGC AGACGCGGCT CTACGATCCG CGCTTTCCGG TGCGCGGCGA CGACCTGAGC 
AACACGTTCT ACGTGACGGG CGCGCCCGTC TACGTGAATC TCGTCGCCGC CGCCGCGCGC 
TATCTCGACG AGGTGCGCTC GAACGAGGCG AGCGACCGGC AGGTCGTGCG CGTCGTGCAG 
CTTCACAACA GCTTCGTCGT CGACCGCCAG TACACGCTGC GCGACAAGGC AGTCGACATC 
CCGGGCATGG CGACCGTGCT CGGCCGCATC TTCGGCCCGG CGCGGCCGGG CGCGCCGGCG 
GACTCGCCCG TCGCGGCGGC CGACGCCACG GCGCGCGGCG GCGCGGGCGG CGCGGCGGGC 
AAGCCGGCGT TCTCGCTTGC CGATGCGTTG CCCGCGCCGC TCGACGCCGG CAACGCGCCG 
GGCGGCGCGG GCTCGACGCA TTCGACAAAC CCGGCGAACG CCGCGAGCCC GATGGGCGGC 
GCGGCGGGCG GCGTCGCGCT GCCCGCGTCG GACGGCGTGC GCGCGGTGGC GTATCCGGAC 
ACGAACAGCG TGATCCTCGT CGGCCGGCTC GACAAGGTGC AGGACATGGA GGCGCTGATC 
CGCTCGCTCG ATGTCGAGAA GCGGCAGATC GAGCTGTCGC TGTGGATCAT CGACATCCGC 
AAGAGCCGGC TCGATCAGCT CGGCATCGAC TGGCAGGGCG CGCTCAATGC GCCGGGCATC 
GGCGTCGGCT TCAACAATCG CGGCGGCAAC GTGACGACGC TCGACGGCAC CAGGTTCCTC 
GCATCGGTCG CGGCGCTCAG CCAGACGGGC GACGCCACCG TGATCTCGCG GCCGATCGTG 
CTCACGCAGG AGAACGTGCC GGCGACGTTC GACAGCAACC AGACGTTCTA CGCGAAGCTG 
ATCGGCGAGC GCACGGTGCA GCTCGATCAC GTGACCTACG GCACGCTCGT CAACGTGCTG 
CCGCGGCTCA CGCGCGATGG GTCGCAGGTC GAGATGATCG TCGACATCGA GGACGGCAAC 
ACCGACGGCG CGACGAGCGA CGGCCAGATC GTCATCGACA ACAACACGAT GCCGCTCGTG 
AACCGCACCG AGATCAACAC GGTCGCGCGC GTGCCGCACG AGATGAGCCT GCTCATCGGC 
GGCAACACGC GCGACGACGT CACGCGCCGC ACGTTCCGGA TTCCCGGGCT GGCCAGCATT 
CCGCTGATCG GCGGGCTGTT TCGCGGGCAT TCGGATCGGC ACGAGCAGGT GGTGCGCGTG 
TTCCTGATCC AGCCGAAGCT GCTGCGCGCG GGCGCGGCCT GGCCCGACGG CCAGCCGTGG 
GAATCGGGCG ATCCGGCGGA CAACGCGACG CTGCGCGCAA CCGTGCAGAT GCTCAAACCC 
TACATGGACG ACAAGTCATG A 

 

Protein sequence

MTGAAFAAPT DAAPLADAPA AASATPDARD GDASRVAAPP ARAPQDDERH FVANDASISV 
LLNALSGRLH KPIVASEKVR RKHVTGEFDL AQPRALLARL GESMSLLWYD DGASIYIYDN 
SEIKNAVVSM RHATVRNLRN FIRQTRLYDP RFPVRGDDLS NTFYVTGAPV YVNLVAAAAR 
YLDEVRSNEA SDRQVVRVVQ LHNSFVVDRQ YTLRDKAVDI PGMATVLGRI FGPARPGAPA 
DSPVAAADAT ARGGAGGAAG KPAFSLADAL PAPLDAGNAP GGAGSTHSTN PANAASPMGG 
AAGGVALPAS DGVRAVAYPD TNSVILVGRL DKVQDMEALI RSLDVEKRQI ELSLWIIDIR 
KSRLDQLGID WQGALNAPGI GVGFNNRGGN VTTLDGTRFL ASVAALSQTG DATVISRPIV 
LTQENVPATF DSNQTFYAKL IGERTVQLDH VTYGTLVNVL PRLTRDGSQV EMIVDIEDGN 
TDGATSDGQI VIDNNTMPLV NRTEINTVAR VPHEMSLLIG GNTRDDVTRR TFRIPGLASI 
PLIGGLFRGH SDRHEQVVRV FLIQPKLLRA GAAWPDGQPW ESGDPADNAT LRATVQMLKP 
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