| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA1536 |
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| Symbol | spaP |
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| ID | 3087792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia mallei ATCC 23344 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_006349 |
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| Strand | - |
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| Start bp | 1664789 |
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| End bp | 1665469 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637565420 |
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| Product | surface presentation of antigens protein SpaP |
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| Protein accession | YP_106126 |
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| Protein GI | 53716462 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4790] Type III secretory pathway, component EscR |
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| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.324595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCGAATA ACGAAATCGC GCTGATCGTC CTGCTGACGG CGGCCACGCT CGTGCCGTTC
GTCGTCGCGG CGGGCTCGTG CTTCATCAAG TTCTCGATCG TGCTCGTGCT CGTGCGCAAC
GCGCTCGGCA TCCAGCAGGT GCCGTCGAAT CTCGCGCTCA ACAGCATCGC GCTCATCATG
TCGCTGTTCG TGATGATGCC CGTCGCGCAG AGCGCGTACC GATATCTGCA GCACCATCCG
CTCGACGTGA TGAGCGGCGC GTCGGTCAAC GAGTTCATCG ACGGCGGGCT CGGCGATTAC
AAGCGCTATC TGACGCGCTA CTCGGACCCG GAACTCGTGC GCTTCTTCGA GCGCGCGCAG
ACCGCGCGTC TGAAGGGCGA CGACGCCGAC GCCGCCGATG CGGACGACGC GCCCGACGGT
CTCGACAATT CGCTGTTCTC GCTGCTGCCC GCGTATGCGC TCACCGAGAT CAAGAGCGCG
TTCAAGATCG GCTTCTACCT GTACCTGCCG TTTCTCGTCG TCGACATGGT GGTGTCGAGC
GTGCTGCTCG CGCTCGGGAT GATGATGATG AGTCCGGTGA CGATCTCCGT GCCGATCAAG
CTGATCCTGT TCGTCGCGAT GGACGGCTGG ACGCTGATCT GCAAGGGCCT GATCGAGCAG
TACCTGAACC TGATGCAATG A
|
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| Protein sequence | MANNEIALIV LLTAATLVPF VVAAGSCFIK FSIVLVLVRN ALGIQQVPSN LALNSIALIM
SLFVMMPVAQ SAYRYLQHHP LDVMSGASVN EFIDGGLGDY KRYLTRYSDP ELVRFFERAQ
TARLKGDDAD AADADDAPDG LDNSLFSLLP AYALTEIKSA FKIGFYLYLP FLVVDMVVSS
VLLALGMMMM SPVTISVPIK LILFVAMDGW TLICKGLIEQ YLNLMQ
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