Gene BMAA1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1493 
Symbol 
ID3086094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1625370 
End bp1626632 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content70% 
IMG OID637565379 
Productmajor facilitator family transporter 
Protein accessionYP_106088 
Protein GI53717290 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.342627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGCACCG CGCGCGGCGG TGCGATCGCG GCCGCGGTGA TCGGCAACTG GCTCGAATTC 
TTCGATTTCA CCGTCTACGG TTTTTTCGCG GTGATCATCG GCAAGCTGTA TTTCCCGTCG
CACGACGCGA CGACGTCGCT GCTGCTGTCG GTCGCGACGT TCGCCGCGGG CTTCTTCACG
CGTCCGCTCG GCAGCATCGT GCTCGGCGTC TACGCGGACC GCCGCGGCCG CAAGGCGGCG
CTGAACCTGA CGATCCTGCT GATGGCGCTC GGCACCGGCA TGATCGCGCT CGCGCCGACC
TACGCGCAGA TCGGCGTGCT CGCGCCGGTG ATCGTCGTGT GCGCGCGGCT GATGCAGGGC
TTTTCGCAAG GCGGAGAGTT CGGCGCGGCG ACGTCGACGC TCGTCGAGCA CGGCGGCGCC
GCGCGCCGGG GCTTTCGCGC GAGCTGGCAG CTCGCGACGC AGGGCGGCGC GGCGCTGATG
GGCTCGGGGT TCGCGGCGCT GCTGTCGAAC ACGCTCGCGA AGGGCGCGCT GGAAAGCTGG
GGCTGGCGCG TGCCGTTCGC GCTCGGTGTG CTGATCGCGC CCGTCGGCAT GTATCTGCGC
CGCCGCCTGG CCGACGATGC GCCGGGCGCC GGCCACCACG GCATCGACGG CGGCGTGCTG
CGCGAGCTGT TCGCGCGGCA CGGCCGCACG GTGCTGCTGC TGACGCTCAC GGTGATGGGC
GGCACCGTAT CGACGTACAT CCTGACGTTC TACATGCCGA CCTACGCGAT CCATACGCTC
GGGCTGCCGA TGAAGCTGTC GATGTTCGTC GGCGTCGCGT CCGGCTGCGT GATGCTCGTC
ACCTGCCCGT TGTTCGGCTG GCTGTCCGAC CGGATCGGCA GCCGGCGCCT GCCGATCTTC
GTCGGGCGCG GCGTGCTCGT CGTGCTGCTG TTTCCGGCGT TCGTGCTGAT GAACCGCTAT
CCGTCGCTCG CGGTCGTGAT GCCGCTCACC GGGCTGATGC TGCTGTTCTA TTCGATGGGC
TCGGCGTCCG AGTTCGCGCT GATGTGCGAA TCGTTTCCGC GCCGCGTGCG CGCGACGGGC
ATCTCGATCG CCTATGCGCT CGCGGTGACG CTGTTCGGCG GCACCGCCCA GCTCGTCGCG
ACGTGGCTCG TGCGCGTGAC GGGCAGCACG CTCGCGCCGG CCGCTTACGT GGCCGTGTGC
GTGATCGTGT CGCTCGTCGC GGTCGGGATG CTGCGCGAGA CGGCGACGGA AACGGCCGAC
TGA
 
Protein sequence
MRTARGGAIA AAVIGNWLEF FDFTVYGFFA VIIGKLYFPS HDATTSLLLS VATFAAGFFT 
RPLGSIVLGV YADRRGRKAA LNLTILLMAL GTGMIALAPT YAQIGVLAPV IVVCARLMQG
FSQGGEFGAA TSTLVEHGGA ARRGFRASWQ LATQGGAALM GSGFAALLSN TLAKGALESW
GWRVPFALGV LIAPVGMYLR RRLADDAPGA GHHGIDGGVL RELFARHGRT VLLLTLTVMG
GTVSTYILTF YMPTYAIHTL GLPMKLSMFV GVASGCVMLV TCPLFGWLSD RIGSRRLPIF
VGRGVLVVLL FPAFVLMNRY PSLAVVMPLT GLMLLFYSMG SASEFALMCE SFPRRVRATG
ISIAYALAVT LFGGTAQLVA TWLVRVTGST LAPAAYVAVC VIVSLVAVGM LRETATETAD