Gene BMAA1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1419 
Symbol 
ID3085922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1523530 
End bp1524492 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content72% 
IMG OID637565306 
Producthydroxyproline-2-epimerase 
Protein accessionYP_106025 
Protein GI53716979 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3938] Proline racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.174271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCATTT CCACCCTGGA TCGACGCGAC ATGAAGCACA TCCACATCAT CGATTCGCAC 
ACGGGCGGCG AACCCACGCG CGTCGTCGTG TCCGGCTTTC CGGCGCTCGG CGGCGGCACG
ATGGCCGAGC GTCTGGCCGT GCTCGCGCGC GAGCACGACC GCTACCGCGC CGCCTGCATC
CTCGAGCCGC GCGGCAGCGA CGTGCTCGTC GGCGCGCTGC TGTGCGAGCC CGTCTCGGCC
GGCGCGGCGG CGGGCGTGAT CTTCTTCAAC AACGCGGGCT ATCTCGGCAT GTGCGGGCAC
GGCACGATCG GCCTCGTGCG CACGCTGCAC CACATGGGGC GCATCGGGCC GGGCGTGCAT
CGGATCGAGA CGCCGGTGGG CGACGTCGAG GCGACGCTGC ACGACGATCT GTCCGTGAGC
GTGCGCAACG TGCTCGTGTA CCGGCACGCG AAGGACGTCG TCGTCGACGT GCCGGGGCAC
GGCGCGGTGA CGGGCGACGT CGCGTGGGGC GGCAACTGGT TCTTCCTCGT GAGCGATCAC
GGCCAGCGCG TCGCGGGCGA GAACGTCGCG GCGCTCGCCG CGTACGCGTC GGCGGTGCGC
GCGGCGCTCG AGCGCGCGGG CGTGACGGGC CGCGACGGCG CGCCGATCGA TCACATCGAG
CTGTTCGCCG ACGATCCCGA GTACGACAGC CGCAGCTTCG TGCTCTGCCC GGGCCACGCG
TACGACCGCT CGCCGTGCGG CACCGGCACG AGCGCGAAGC TCGCGTGCCT CGCCGCCGAC
GGCAAGCTCG TGGCGGGCGT GACGTGGCGG CAGGCGAGCG TGATCGGCAG CGTGTTCTCG
GCGAGCTACG CGGCGGCCGA AGGCGGCGTC GTGCCGACGA TCCGCGGCAG CGCGCACCTG
AGCGCGGAGG CGACGCTCGT GATCGAGGAC GACGATCCGT TCGGCTGGGG CATCGCATCG
TGA
 
Protein sequence
MRISTLDRRD MKHIHIIDSH TGGEPTRVVV SGFPALGGGT MAERLAVLAR EHDRYRAACI 
LEPRGSDVLV GALLCEPVSA GAAAGVIFFN NAGYLGMCGH GTIGLVRTLH HMGRIGPGVH
RIETPVGDVE ATLHDDLSVS VRNVLVYRHA KDVVVDVPGH GAVTGDVAWG GNWFFLVSDH
GQRVAGENVA ALAAYASAVR AALERAGVTG RDGAPIDHIE LFADDPEYDS RSFVLCPGHA
YDRSPCGTGT SAKLACLAAD GKLVAGVTWR QASVIGSVFS ASYAAAEGGV VPTIRGSAHL
SAEATLVIED DDPFGWGIAS