Gene BMAA1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1406 
Symbol 
ID3087809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand- 
Start bp1513486 
End bp1514166 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content67% 
IMG OID637565294 
ProductDJ-1/PfpI family protein 
Protein accessionYP_106014 
Protein GI53716956 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTC TCGTGGTTCT CACTTCGCAC GACGAACTCG GCACGACCGG CAAGAAAACC 
GGATTCTGGC TCGAGGAACT GGCCGCGCCG TACTACGCGC TGAAAGACGC CGGCGCCGAG 
CTCACGCTCG CGTCGCCGCG CGGCGGGCTG CCGCCCGTCG ATCCGAAGAG CGACGATCCG 
GCTTCACAAA CCGACGCGAC GCGCCGTTTC GCGAAGGACG CCGAAGCACA GGCCGCGCTC 
GCGTCGACGC GCAAACTCGC CGACGTGTCG ATCGACGATT ACGACGCGGT GTTCTATCCC 
GGCGGCCACG GCCCGCTGTG GGACCTCGCC GAGGACCGTC ATTCGATCGC GCTGATCGAG 
CGCGCGATCG CGACGAACAA GCCCGTCGCG GCCGTCTGCC ATGCGCCCGG CGTACTGCGC 
AACGTGAAGG ATCCGTCGGG CGCGTCGTTC GTGAAGGGCC TGAATGTCAC GGGCTTCTCG 
AACAGCGAGG AGGCGGCCGT CGAGCTCACC GAGGTCGTGC CGTTTCTCGT CGAGGACATG 
CTGAAGACGA ACGGCGGCAA TTACTCGCGC GCGGCCGACT GGGCGCCGCA CGTCGTCGTC 
GACGGGCTGC TCGTCACAGG GCAGAACCCG GCGTCGTCGG AGCCGGTTGC CGAGGCGCTG 
CTCAATCTGC TCGAGACGTA A
 
Protein sequence
MKILVVLTSH DELGTTGKKT GFWLEELAAP YYALKDAGAE LTLASPRGGL PPVDPKSDDP 
ASQTDATRRF AKDAEAQAAL ASTRKLADVS IDDYDAVFYP GGHGPLWDLA EDRHSIALIE 
RAIATNKPVA AVCHAPGVLR NVKDPSGASF VKGLNVTGFS NSEEAAVELT EVVPFLVEDM 
LKTNGGNYSR AADWAPHVVV DGLLVTGQNP ASSEPVAEAL LNLLET