| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA1323 |
|---|
| Symbol | |
|---|
| ID | 3087777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | - |
|---|
| Start bp | 1424227 |
|---|
| End bp | 1425042 |
|---|
| Gene Length | 816 bp |
|---|
| Protein Length | 271 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637565216 |
|---|
| Product | OmpA/SmpA/OmlA family outer membrane lipoprotein |
|---|
| Protein accession | YP_105939 |
|---|
| Protein GI | 53717117 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG2913] Small protein A (tmRNA-binding) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.393015 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAAAT ATGCGGCCGC CGCCGGGATC TGCGCGGCGC TGCTGACGGG ATGCGGAATG
GCGCCGACGA GCGCGCCGGA CGGCTCGGTC GGGTTTCCGG CGCGCGACAG CGCGTGGCTG
AAGGAAGGCA CGTTCGTGAA TGTCGAGAAC CTGCGCCAGA TCGGGCCCGG TCTCGACAAG
AACCAGGTAT ATGCACTGAT CGGCGAGCCG CACTTCAGCG AGGGCATCAT CGGCGTACAC
GTGTGGAACT ATGTATTCAA TTTCCGCACG GGGCCGGGGG CGAGCGATGT CGTGACGTGC
CAGTACCAGA TCCAGTACGA CAAGCACTAT CGCGTGAAAT CGACGTACTG GAAGGAGCCG
GCGTGCAAGG CGCTCGTCGA CGGCCCGAAG CCGGCGCCCG CCGTGCAGGC GCCGCCGGGC
GACGACGTGA AGCAGTTCAC GCTCGATTAC CAACTGCTGT TCCCGTTCGA CAAATCGGCG
CTGCGCGACC TGCTGCCGGC CGGGCGGGCC GAACTGGACC GGATCGCGGC CACGCTGGAG
CAGCAGTACC AGCACATCCG CTCGGTGCGG GTCACGGGCT ACACCGACCG GCTCGGCACG
GACGCATACA ATCGGCAGCT GTCGCTCGCG CGGGCCGAAA CGATTCGTGC GTATCTGACG
ACGCGCGGCC TGCCCGGCGA TCTGATCGTC GCGCAGGGGC TCGGCAAAGC CGATCCGGTG
AGCAACGGCT GCCCCGCCGG GCGTTCGGCG GAGGCGATCG CGTGTCTCGC GCCGGACCGG
CGCGTGAGGA TCGACGTCGC CGGCGAACGG CGCTAG
|
|---|
| Protein sequence | MSKYAAAAGI CAALLTGCGM APTSAPDGSV GFPARDSAWL KEGTFVNVEN LRQIGPGLDK
NQVYALIGEP HFSEGIIGVH VWNYVFNFRT GPGASDVVTC QYQIQYDKHY RVKSTYWKEP
ACKALVDGPK PAPAVQAPPG DDVKQFTLDY QLLFPFDKSA LRDLLPAGRA ELDRIAATLE
QQYQHIRSVR VTGYTDRLGT DAYNRQLSLA RAETIRAYLT TRGLPGDLIV AQGLGKADPV
SNGCPAGRSA EAIACLAPDR RVRIDVAGER R
|
|---|
| |