Gene BMAA1288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1288 
Symbol 
ID3087076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1391969 
End bp1393123 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content69% 
IMG OID637565182 
Productputative opgC protein 
Protein accessionYP_105910 
Protein GI53716883 
COG category[S] Function unknown 
COG ID[COG4645] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGCCG CGCCCGCCCC ACGTTACGTC GAGCTCGACT TCTTTCGCGG TCTCGTGCTG 
CTCGTCATCG TCGTCGATCA CATCGGCGGC AGCATGCTGT CGCGCGTCAC GCTGCACACG
TACGCGCTGT GCGACGCGGC CGAGGTGTTC GTGTTCCTCG GCGGCTTCGC GACCGCGATC
GCGTACAACT CGCTCGCCAC GCGCCACACC GAGGCCGCCG CGCGCCAGCG TTTCATCAAA
CGCGCGTTTG AAATCTATCG CGCGTTTTTG CTGACGGCGG GCCTGATGCT CTTCATCACC
GCGGCGCTGA ACGCGTTCGC GATCGACGCG CCGAACATGC CGACCAACGA TCTCGACGGG
CTGATGCATG CGCCGCTCGC CGCGCTGCGC GACATCCTGC TGCTCAGGCG CCAGCCGTAT
CTCGCGTCGG TGCTGCCGAT GTACGCGTTC TTCGCGCTGC TCGTGCCGCT CGCGCTGCCC
GTCGCGCGCG GCCGCTGGTG GTGGCTGCTC GTCGCCGTGA GCGCCGCGAT CTGGCTCGCC
GCGCGCAGGA TCGCCGGCTA TCTGCCGACC GTGGACGGCG TGCCGTGGGA TTTCAATCCG
TTCGCGTGGC AGTTCCTGTT CGTGCTCGGC ATCGTCGCGC GCTGCCAGCC GATCTATCCG
GTGCTCGCCA AACGGCCGGT CGGCTGGTTC GCGCTCGCCG CCGCGATCGC GGTGGTCGCG
GCGGGCGCGT ACTACCGGCT GCGCATCGAA CCGTTCCCGA CCGATCCGTC GATCAAGCAG
AATCTCGGCG CGCTGCGGCT CGCGAACTTC ATCGCGATCG CCTGGCTCGC CGCGAAGCTC
GTCCATCTCG GCTGGATGCA CCGGATCGCG CGGGCGATGC CGTGGATCGG CACGATCGGC
CGCCAGGGCC TGCTGTGCTT TGTCGCCGGC ACGGGCATTT CGCTGCTCGT CGATTCGCTG
CTGTACGCGG CGACGGACGG CTATCTGGAC CTGCGGCTCG GCCTCGCCGC CGACGCGGCC
GCGATCGGCC TGCTGTACGT CGTCGCGAAG CTGTACGCGC CGCTCGTCGC GCGGGCGTCG
GATTTCGTCA GGCAATCGCC GCTGCTGCAG CCGCTGCGGC CGTTCCGGCT GCCACTGCGC
CGCCCGAAAC GCTGA
 
Protein sequence
MNAAPAPRYV ELDFFRGLVL LVIVVDHIGG SMLSRVTLHT YALCDAAEVF VFLGGFATAI 
AYNSLATRHT EAAARQRFIK RAFEIYRAFL LTAGLMLFIT AALNAFAIDA PNMPTNDLDG
LMHAPLAALR DILLLRRQPY LASVLPMYAF FALLVPLALP VARGRWWWLL VAVSAAIWLA
ARRIAGYLPT VDGVPWDFNP FAWQFLFVLG IVARCQPIYP VLAKRPVGWF ALAAAIAVVA
AGAYYRLRIE PFPTDPSIKQ NLGALRLANF IAIAWLAAKL VHLGWMHRIA RAMPWIGTIG
RQGLLCFVAG TGISLLVDSL LYAATDGYLD LRLGLAADAA AIGLLYVVAK LYAPLVARAS
DFVRQSPLLQ PLRPFRLPLR RPKR