Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA1259 |
Symbol | |
ID | 3087023 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | - |
Start bp | 1357847 |
End bp | 1359103 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637565153 |
Product | cupin family protein |
Protein accession | YP_105889 |
Protein GI | 53716842 |
COG category | [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG2140] Thermophilic glucose-6-phosphate isomerase and related metalloenzymes |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence [TIGR03404] bicupin, oxalate decarboxylase family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0758699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAATC TGTCCCGACG CAAGATGCTC GCCGGCACGG CCGGCGCGCT CGCCGCCGCC GGCATCGCCG TTTCCGCGAA GGCCGCTTCG TTCGGCAATC CGGACAGCCC GGCCGAGGGC GCGGTGAACG CGCGCAATCC GCAGAGCCTG ACCGATCCGG GGCCGCAAAA TCCGGCGCTG ATGAAGGAGT TTCCTTCGTT TCAGAGTCCG CCGGCCACCG ACATTAACGG CATGCCGATT TTCTGGGCGT CGTTCAATAA TGCGCACAAG CGCATTCAGA ACGGCGGCTG GGCGCGCGAA GTCACGCAGG AGGATTTCGC GATTTCCGAA ACGATTTCCG GCGTCAACAT GCGGCTCGCG CGCGGCGGCA TTCGCGAGAT GCACTGGCAC CAGCAGGCCG AATGGGCGTT CATGCTCGAC GGCCGCTGCC GGATCACCGT GCTCGATGAA GAGGGGCGGC CGTCCGTGCA GGACGTGAAG ACGGGCGACC TCTGGTATTT CCCGCCGGGG CTGCCGCATT CGCTGCAGGG GCTCGGCGTC GACGGCGCCG AATTCCTCCT CGCGTTCGAC AACGGCCGCG CGTCCGAATT CAACACGCTG CTCGTGACGG ACTGGATCGC GCACACGCCG CCCGACGTGC TCGCGCTGAA CTTCGGCGTG CCCGCCGATG CATTCCGCCG CATTCCGCTC GACAATCTGT GGATCTTCCA GGGCGACGAT CCCGGGCCGC TCGCCGCCGC GCAGCGCGCG TCGGCGTCGT CGCGCGGCGC GCCGAAGCAT CCGTTCATCT TCTCGATGGG CGACATGAAG CCGAACGTGA AGACGCGCGG CGGCGAAGTG CGGATCGTCG ACAGCACGAA CTTCGCTGTG TCGAAGACGA TCGCGGCCGC GCTCGTCACG GTGAAGCCGG GCGGCATGCG CGAGCTGCAC TGGCACCCGA ACGCGGACGA ATGGCAGTAC TACATCCGGG GCGACGCGCG CATGACGGTG TTCGACACCG GCCCGAAGGC GCAGACGGCC GATTTCCGCG CGGGCGACGT CGGCTACGTG AAGAAGAGCC TCGGCCACTA CGTGCAGAAC ACGGGCACGA CCGATCTCGT GTTCCTCGAG ATCTTCAAGG CGGACCGCTA CGCGGAGGTT TCGCTGTCCG ACTGGCTCGC GCACACGCCG CCGCAGCTCG TCGAGGCGCA TCTGCATATC GCGCCCGACG TGATCGCGCG CTTTCCGCGC AACCGGCCGG ACGTCGTGCC GGCGTAA
|
Protein sequence | MTNLSRRKML AGTAGALAAA GIAVSAKAAS FGNPDSPAEG AVNARNPQSL TDPGPQNPAL MKEFPSFQSP PATDINGMPI FWASFNNAHK RIQNGGWARE VTQEDFAISE TISGVNMRLA RGGIREMHWH QQAEWAFMLD GRCRITVLDE EGRPSVQDVK TGDLWYFPPG LPHSLQGLGV DGAEFLLAFD NGRASEFNTL LVTDWIAHTP PDVLALNFGV PADAFRRIPL DNLWIFQGDD PGPLAAAQRA SASSRGAPKH PFIFSMGDMK PNVKTRGGEV RIVDSTNFAV SKTIAAALVT VKPGGMRELH WHPNADEWQY YIRGDARMTV FDTGPKAQTA DFRAGDVGYV KKSLGHYVQN TGTTDLVFLE IFKADRYAEV SLSDWLAHTP PQLVEAHLHI APDVIARFPR NRPDVVPA
|
| |