Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA1100 |
Symbol | |
ID | 3087843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | - |
Start bp | 1146958 |
End bp | 1148292 |
Gene Length | 1335 bp |
Protein Length | 444 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637565001 |
Product | major facilitator family transporter |
Protein accession | YP_105763 |
Protein GI | 53716725 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0341901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGAGAA ACGCATTGAC CCGGGGCATC CCACCGAGCC CGCCGGCGCG CCAGCCGCGC CGCGCGGCCG GCGCCGCGTT CGTCGGCACG ATGATCGAGT GGTACGACTT CTACATCTAC GCGAACGCGG CCGCGCTCGT CTTCGGCGAG CTGTTCTTCC CGTCGCACGA TCCGTTCACG AGCACGATGG CGTCGTTCGC GACGTTCGCG GTCGGCTTCT TCGCGCGCCC GCTCGGCGGG CTCTTCTTCG GCCATCTCGG CGACCGGATC GGCCGCAAGA AGGCGCTGAT GGCGACGCTC GCGCTGATGG GCGCGGCGAC GGTCTGCGTC GGTCTGCTGC CGACCTACGA ACGCGTCGGC CTGCTCGCGC CCGTGCTGCT CGTGCTGCTG CGCATCGTTC AGGGCATCGC GGTGGGCGGC GAGTGGGGCG GCGCGGTGCT GATGGCGGGC GAGCATGCGC CGTATGGGCG GCGCACGTTC TTCGCTTCGT TCGCGCAGTT GGGCAGCCCG GCCGGGCTGA TCCTGTCGCT CGTCGCGTTT CGCGCGGTCG CGTCGATGGA GCACGGCGCG TTCATGTCCT GGGGCTGGCG GCTGCCGTTT CTCGCGAGCA TCGCGCTGCT CGCGGTCGGC GTGTTCGTGC GGCTGAAGGT CGACGAATCG CCCGAGTTCG CGCATGAGAA GGCGATGTCG CGCACCGTCG CGCGGCCGCT CGCCGAGGCG CTGCGCACGT CGCGCGCGAT GCTGCTGTTC TGCCTGTGCG CGAACACGAT CGGTATCGCG GGGCTGTATT TCACGAACAC GTTCATGATC GCGTTCACGA CGCAGCATGT GGGCGTGACG AAATCGCTGA TCCTCGATTG CCTGTTCATC GTCGCGATCA TCCAGTTCGT GACGCAGCCG ATCGCCGCGT GGCTCGGCGG CAAGCTCGGC GACGCACGCT TTCTCAAGCT CGCCGCGCTG TTCGCGATGG CCTCGCCCTA TCCGATGTTC GCGCTCGTGC AGACGGGGCG GCTCGCGCCG ATGGTGATCG GCATCGCGAT CGCGACCGTG TTTCTCGCCG GTTTCTACTC GGTGATCGCG GGCTTCGTGA GCGGCGCGTT CCCGACGCGC GTGCGCTATT CGGCGATCTC GATCTCGTAC CAGATGTGCG GCGCGATCGC GGGCGGGCTG ACGCCGCTCG TCGGCACGTG GCTCGCGCAC CGGTTCGCCG GGCAGTGGTG GCCGCTCGCG GTGTTCTATA CGTGCCTCGC GGCGCTCTCG CTCGGCGGCG TGATCGCGCT CGACGCGCGC CGCCATCGGC GGGCCGACGT CGCCGACGCC GTGCTCACGC GCTGA
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Protein sequence | MRRNALTRGI PPSPPARQPR RAAGAAFVGT MIEWYDFYIY ANAAALVFGE LFFPSHDPFT STMASFATFA VGFFARPLGG LFFGHLGDRI GRKKALMATL ALMGAATVCV GLLPTYERVG LLAPVLLVLL RIVQGIAVGG EWGGAVLMAG EHAPYGRRTF FASFAQLGSP AGLILSLVAF RAVASMEHGA FMSWGWRLPF LASIALLAVG VFVRLKVDES PEFAHEKAMS RTVARPLAEA LRTSRAMLLF CLCANTIGIA GLYFTNTFMI AFTTQHVGVT KSLILDCLFI VAIIQFVTQP IAAWLGGKLG DARFLKLAAL FAMASPYPMF ALVQTGRLAP MVIGIAIATV FLAGFYSVIA GFVSGAFPTR VRYSAISISY QMCGAIAGGL TPLVGTWLAH RFAGQWWPLA VFYTCLAALS LGGVIALDAR RHRRADVADA VLTR
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