| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA1057 |
|---|
| Symbol | |
|---|
| ID | 3087248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | + |
|---|
| Start bp | 1100359 |
|---|
| End bp | 1101360 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637564959 |
|---|
| Product | putative periplasmic sugar-binding protein |
|---|
| Protein accession | YP_105723 |
|---|
| Protein GI | 53716951 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.488674 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGATTGC GCTGGCCCCA AGCCGCCCTC GTCTGCGCGA GCCTCGCCGC CGGTTTGTCG
GCGGCGGCGC CCGCACATGC GCAAGGCGCG GCCCCGGTGA AGATCGGCTT CGTCGTCAAG
CAGCCCGACG ACCCGTGGTT TCAGGACGAA TGGCGCTTCG CCGAGCAGGC GGCGAAGGAC
AAGCACTTCA CGCTCGTGAA GATCGCCGCG CCGAGCGGCG AGAAGGTGTC GACCGCGCTC
GACAGCCTCG CCGCGCAAAA GGCGCAGGGC GTGATCATCT GCGCGCCCGA CGTGAAGCTC
GGCCCCGGCA TCGCCGCGAA GGCGAGGCGC TACGGGATGA AGCTGATGTC GGTCGACGAT
CAGCTCGTCG ACGGGCGCGG CGCGCCGCTC GCCGACGTGC CGCACATGGG CATTTCCGCA
TACCGGATCG GCCGGCAGGT CGGCGATGCG ATCGCCGCCG AGGCGAAGCG GCGCGGCTGG
AATCCGGCCG AGGTCGGCGT GCTGCGCCTC GCGTACGACC AGTTGCCGAC CGCCCGCGAG
CGCACGACGG GCGCGGTCGA TGCGCTGAAG GCCGCGGGCT TCGCTGCGGC GAACGTCGTC
GACGCGCCGG AGATGACGGC CGATACCGAA GGCGCGTTCA ACGCCGCGAA CATCGCGTTC
ACCAAGCATC GGAACTTCAA GCACTGGGTG GCGTTCGGAT CGAATGACGA CACGACGGTC
GGCGCTGTGC GCGCGGGCGA GGGGCGCGGC ATCGGGGCGG ACGACATGAT CGCGGTCGGC
ATCAACGGCA GCCAGGTCGC GCTGAACGAA TTCGCGAAAC CGAAGCCGAC GGGCTTTTTC
GGCTCGATCC TGCTGAATCC GCGGCTGCAC GGCTACGACA CGTCGGTCAA CATGTACGAC
TGGATCACGC AGAACCGCGC GCCGCCGCCG GTCGTGCTGA CGTCCGGCAC GCTGATCACG
CGCGCGAACG AAAAGACGGC GCGCGCGCAG CTCGGGCTGT GA
|
|---|
| Protein sequence | MGLRWPQAAL VCASLAAGLS AAAPAHAQGA APVKIGFVVK QPDDPWFQDE WRFAEQAAKD
KHFTLVKIAA PSGEKVSTAL DSLAAQKAQG VIICAPDVKL GPGIAAKARR YGMKLMSVDD
QLVDGRGAPL ADVPHMGISA YRIGRQVGDA IAAEAKRRGW NPAEVGVLRL AYDQLPTARE
RTTGAVDALK AAGFAAANVV DAPEMTADTE GAFNAANIAF TKHRNFKHWV AFGSNDDTTV
GAVRAGEGRG IGADDMIAVG INGSQVALNE FAKPKPTGFF GSILLNPRLH GYDTSVNMYD
WITQNRAPPP VVLTSGTLIT RANEKTARAQ LGL
|
|---|
| |