Gene BMAA1039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1039 
Symbol 
ID3087349 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand+ 
Start bp1076881 
End bp1077489 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content72% 
IMG OID637564941 
Productserine protease 
Protein accessionYP_105705 
Protein GI53716928 
COG category[R] General function prediction only 
COG ID[COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.224714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTCG CCATCGTCGT CCTGAACGTG ATCGGTTTCC TCGTCGAGCT CGCCGCGCCC 
GAGCGCGTAC TGTCGCTGTT CGCGCTATGG CCGCCGCGCG CGGGCGCGGG CTTGCCGCCC 
GCCGCCGCAC CCGCGTTCCA TGTCTGGCAG CTCGTCACGT ACAGCGCGCT GCACGCGGGG 
CTGTCGCACC TGCTGTTCAA CATGCTCGGG CTCGTGATGT TCGGCCGCGA TGTCGAGCGC 
GCGCTCGGCC GCGCGCGCTT CGGCACGCTG TATCTCGCGA GCGTCGTATG CGGCGCGCTC 
ACGCAGCTCG CGCTCGCGCG CTATTCGGCG GCGGCCGCCG CGCCGACGAT CGGCGCGTCC 
GCCGGCGTGT TCGGCGTGCT CGCCGCGTAC GCGCTGCTGT ACCCGTCGCG CCGCGTCGTG 
CTGCTGATTC CGCCGATTCC GATGCGCGCG TGGGTGTTCG CGCTGCTCTA CGCGGGGGGC 
GAACTGCTGC TCGGCGTCGC GGGCGCGGCG AGCGGCATCG CGCATTTCGC GCATCTGGGC 
GGGATGTTCG GCGCGATCGC GCTGATGCTG GCATGGGGAC GGCCGCGCAG CGAATGGCCG 
GTTCAATGA
 
Protein sequence
MTLAIVVLNV IGFLVELAAP ERVLSLFALW PPRAGAGLPP AAAPAFHVWQ LVTYSALHAG 
LSHLLFNMLG LVMFGRDVER ALGRARFGTL YLASVVCGAL TQLALARYSA AAAAPTIGAS 
AGVFGVLAAY ALLYPSRRVV LLIPPIPMRA WVFALLYAGG ELLLGVAGAA SGIAHFAHLG 
GMFGAIALML AWGRPRSEWP VQ