Gene BMAA1029 details

Gene Information

• Locus tag: BMAA1029
• Symbol: czcA
• ID: 3087909
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006349
• Strand: -
• Start bp: 1065803
• End bp: 1069036
• Gene Length: 3234 bp
• Protein Length: 1077 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 637564931
• Product: heavy metal efflux pump CzcA
• Protein accession: YP_105698
• Protein GI: 53716916
• COG category: [P] Inorganic ion transport and metabolism
• COG ID: [COG3696] Putative silver efflux pump
• TIGRFAM ID: [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.0434658
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTGAGC GCCTGATCCG CTTCGCGATC GCGCACCGCT GGCTCGTGAT GCTCGCGATC 
GTCGCGGCCG CGTCGCTCGG CGTCTACAGT TACCAGAAGC TGCCGATCGA CGCGGTGCCC 
GACATCACGA ACGTGCAGGT GCAGGTCAAC ACGTCCGCGC CCGGCTATTC GCCGCTCGAG 
GCCGAGCAGC GGATCACGTA TCCGGTCGAG ACCGCGATGG CCGGCCTGCC GAACCTCGAG 
CAGACGCGCT CGATCTCGCG CTACGGGCTG TCGCAGGTCA CCGTGATCTT CAAGGACGGC 
ACCGACATCT ATTTCGCGCG CCAGCTCGTC AACGAGCGGA TCCAGGAAGC GAAGGACAAG 
CTGCCGCCCG GGATCGCGCC CGCGATGGGG CCGACCTCGA CGGGCCTGGG CGAGATCTAC 
CTGTGGACGG TCGAGGCGGA TGCGGGCGCG CGCAAGCCGG ACGGCACGCG CTACACGAGC 
GCCGATCTGC GCGAGCTGCA GGACTGGGTC GTGCGTCCGC AGTTGCGCAA CGTGCCGGGC 
GTGACCGAGG TGAACTCGAT CGGCGGCTAC GTGAAGGAAT ACCGCGTCGC GCCGAATCCG 
ACGAAGCTGA TGTCGTACGG GCTCACGCTC GCCGACGTCG TGCGCGCGCT CGAGCGCAAC 
AACGACAACG TCGGCGCGGG CTACATCGAA AAGCGCGGCG AGCAGTATCT CGTGCGCGTG 
CCGGGCCAGG CGCGCTCGGC CGAGGACATC GCGAACATCG TGCTCGTGAA CGCGGGCGGC 
GTGCCGGTGC GGATGAAGGA CATCGGCGCC GTCGATCTCG GCCGCGAGCT GCGCACGGGC 
GCCGCGACCG CGAACGGCGA GGAAGTCGTG CTCGGCACCG TGTTCATGCT GATGGGCGAG 
AACAGCCGCA CGGTCGCGAA GGCGGTGGCC GCGAGGATGG CCGACGTGAA CCGCACGCTG 
CCCGCCGGCG TGCGCGCGAT TGCCGTGTAC GACCGCACGG TGCTCGTCGA GAAGGCCGTG 
CGGACGGTGA AGAAGAACCT GCTCGAAGGC GCGGTGCTCG TGATCGCGGT TCTCTTCCTG 
TTCCTCGGCA ACATCCGCGC GGCGGTGATC ACCGCGCTCG TGATTCCGCT GTCGATGCTG 
ATGACCTTCA CCGGCATGGT CAACGCGAAG GTCAGCGCGA ACCTGATGAG CCTCGGCGCG 
CTCGATTTCG GCATCATCGT CGACGGCGCG GTCGTGATCG TCGAGAACTG CATTCGCCGG 
CTCGCGCACG CGCAGCAGGC GGCGGGCCGC CCGCTCACCC GCGACGAGCG CTTCGCCGAA 
GTGTTCGCCG CGTCGCAGGA GGCCCGCCGC GCGCTGATCT TCGGGCAACT GATCATCATG 
GTCGTCTATC TGCCGATCTT CGCGTTGACG GGCGTCGAGG GGAAGATGTT CCATCCGATG 
GCGATCACCG TCGTGATGGC GCTCGCGGCC GCGATGGCGC TCACCGTGAC GTTCATTCCG 
GCCGCGGTCG CGCTGTTCAT CGGCCGCCGA GTGGAGGAGA AGGAGAACCG GCTGATGAGC 
GCGGCGAAGC GGCTCTACGC GCCCGTGCTC GATGCGTTCG TCGCGCGGCC CGGGCAGGTG 
CTCGCGGGCG CGACGGCCGT GGTCGCGCTC TCGCTCGTGC TGGCGACGCG GCTCGGCAGC 
GAATTCATCC CGAGCCTGAA CGAAGGCGAC CTCGCGGTGT CCGCGCAGCG CATTCCGGGC 
ACGAGCCTCA CGCAATCGGT CGCGATGCAG CAGTCGATCG AGAAGACGCT GAAGGCGCGC 
TTCCCGGAGA TCGACCGCGT GTTCGCGCGC ACCGGCACCG CGGAGATCGC CGCCGATCCG 
ATGCCGCCGA ACCTGTCGGA CGGCTACATC ATGCTCAAGC CCGCCGACCA GTGGCCGGAC 
CCGCGCAAGT CGCGCGATGC GCTGCGTGGG GAAATCGAGG CGGTGCTCGC GCAGTTGCCG 
GGCAACGCGT ACGAGTTCTC GCAGCCGATC CAGTTGCGCT TTAACGAGCT GATCTCCGGC 
GTGCGCAGCG ACGTCGCGGT CAAGATCTTC GGCGACGACA TGGCGACGCT CAACGCAACG 
GGCGAGCAGA TCGCGGCCGC GCTGCAGAAG GTGCCGGGCG CGTCCGAGGT GAAGGTCGAG 
CAGACCACGG GCCTGCCCGT GCTGACCGTC AACCTCGATC GCGACAAGCT CGCGCGCTAC 
GGCGTGACGG TGGGCGACGT GCAGGACACG GTCGCCGCGG CGGTCGGCGG GCGCAAGGCC 
GGCCTGCTGT TCCAGGGCGA TCGCCGCTTC GACATCGTCG TGCGGCTGCC CGACGAGCTG 
CGCACCGACG TCGAGGCGAT CAAGCGGCTG CCGATCGCGC TACCCCTGGC CGCGCCGGCG 
GGCGCGAGCG GCCCGCTCGC GCAGGCGCCG TACGTGCCGC TCGCCGAGCT CGCGACGGTG 
GACACATCGC CCGGGCCGAA CCAGATCAGC CGCGAGGACG GCAAGCGCCG CGTCGTCGTC 
AGCGCGAACG TGCGCGGGCG CGACGTCGGC TCGTTCGTCG CCGACGCGCG CGAGCGGATC 
GCCTCGGACG TCCGGGTGCC CGCCGGCTAC TGGCTGTCGT GGGGCGGCCA GTTCGAACAG 
TTGCAAAGCG CGAGCGAGCG GCTGAAGATC GTCGTGCCGC TCGCGCTCGC GATGGTGTTC 
GTGCTGCTGT TCGTGATGTT CAACAACGCG AAGGACGGCC TGCTCGTGTT CACCGGCATC 
CCGTTCGCGC TCACGGGCGA CGTCGTGTCG CTGTGGCTGC GCGGCATTCC GCTGTCGATC 
ACGGCCGCGG TCGGCTTCAT CGCGCTATCG GGCGTTGCGG TGCTCAACAG CCTCGTGATG 
ATCTCGTTCA TCCGCAACCT GCGCGACGAA GGCGCGCCGC TCGACGCCGC GGTGCGCGAA 
GGCGCGCTCA CGCGGCTGCG GCCGGTGCTG ATGACGGCGC TCGTCGCGTC GCTCGGCTTC 
CTGCCGATGG CGTTCGCCAC CGGCACGGGC GCGGAGGTCC AGCGCCCGCT CGCGACGGTC 
GTGATCGGCG GCATCCTGTC GTCGACCGCG CTGACGCTGC TCGTTTTGCC GGTACTCTAT 
CGGGTGGCGC ACGCCGCGCC GCCGCGCGCC ACGCTCGGCG CACGCGCGGC CGGATGGCTC 
GCGAGGCTCG CGCCCGCGGC CGTGCTGCGC CGGCGGCGCG AATCATCGAG GTGA 

 

Protein sequence

MFERLIRFAI AHRWLVMLAI VAAASLGVYS YQKLPIDAVP DITNVQVQVN TSAPGYSPLE 
AEQRITYPVE TAMAGLPNLE QTRSISRYGL SQVTVIFKDG TDIYFARQLV NERIQEAKDK 
LPPGIAPAMG PTSTGLGEIY LWTVEADAGA RKPDGTRYTS ADLRELQDWV VRPQLRNVPG 
VTEVNSIGGY VKEYRVAPNP TKLMSYGLTL ADVVRALERN NDNVGAGYIE KRGEQYLVRV 
PGQARSAEDI ANIVLVNAGG VPVRMKDIGA VDLGRELRTG AATANGEEVV LGTVFMLMGE 
NSRTVAKAVA ARMADVNRTL PAGVRAIAVY DRTVLVEKAV RTVKKNLLEG AVLVIAVLFL 
FLGNIRAAVI TALVIPLSML MTFTGMVNAK VSANLMSLGA LDFGIIVDGA VVIVENCIRR 
LAHAQQAAGR PLTRDERFAE VFAASQEARR ALIFGQLIIM VVYLPIFALT GVEGKMFHPM 
AITVVMALAA AMALTVTFIP AAVALFIGRR VEEKENRLMS AAKRLYAPVL DAFVARPGQV 
LAGATAVVAL SLVLATRLGS EFIPSLNEGD LAVSAQRIPG TSLTQSVAMQ QSIEKTLKAR 
FPEIDRVFAR TGTAEIAADP MPPNLSDGYI MLKPADQWPD PRKSRDALRG EIEAVLAQLP 
GNAYEFSQPI QLRFNELISG VRSDVAVKIF GDDMATLNAT GEQIAAALQK VPGASEVKVE 
QTTGLPVLTV NLDRDKLARY GVTVGDVQDT VAAAVGGRKA GLLFQGDRRF DIVVRLPDEL 
RTDVEAIKRL PIALPLAAPA GASGPLAQAP YVPLAELATV DTSPGPNQIS REDGKRRVVV 
SANVRGRDVG SFVADARERI ASDVRVPAGY WLSWGGQFEQ LQSASERLKI VVPLALAMVF 
VLLFVMFNNA KDGLLVFTGI PFALTGDVVS LWLRGIPLSI TAAVGFIALS GVAVLNSLVM 
ISFIRNLRDE GAPLDAAVRE GALTRLRPVL MTALVASLGF LPMAFATGTG AEVQRPLATV 
VIGGILSSTA LTLLVLPVLY RVAHAAPPRA TLGARAAGWL ARLAPAAVLR RRRESSR