Gene BMAA1013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1013 
Symbol 
ID3087892 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp1041695 
End bp1042201 
Gene Length507 bp 
Protein Length168 aa 
Translation table11 
GC content65% 
IMG OID637564915 
ProductECF subfamily RNA polymerase sigma factor 
Protein accessionYP_105684 
Protein GI53716890 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.375663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGTG CAGATATCGC TTCTACACTT CCGCCGTTGC TACCCCGTCT GCTCGCCTTC 
GCTCGCCGCC TCTGCGGCGA TACGCACGAC GCCGACGATC TGGTGCAGCG TGCGTGCCTG
AGGGCGCTCG AGCGCCCTCA TCAATTGCAG CGGGATACGT CGCCGCTCAA TTGGATGATG
GCGATCGTGC ATTCGAGCTG GATGAGCGAA TTGCGCGCGA GGCATGTGCG GCATCGATTG
CAAACCGACT GGAACGACGA CGTCATCGAC GCGCTGCCCG GGCCGACGGC CGCCGATCCG
CAAATCCACG CGATGAATGC GCAGATCATT CGCGCCGTCG AATTGCTGCC TGAAACACTG
CGCGCGGCGA TGCTGCTGAT TGCCGTCGAA GGGCTGAGCT ACCAGGAAGC GGCCGGCGTG
CTCGACGTGC CGATCGGAAC CGTGATGAGC CGCCTGTGGC GCGCGCGCCA ATCCATCGGC
GCGCAGTTCG GCGCGCGCGA GCGCTAG
 
Protein sequence
MTGADIASTL PPLLPRLLAF ARRLCGDTHD ADDLVQRACL RALERPHQLQ RDTSPLNWMM 
AIVHSSWMSE LRARHVRHRL QTDWNDDVID ALPGPTAADP QIHAMNAQII RAVELLPETL
RAAMLLIAVE GLSYQEAAGV LDVPIGTVMS RLWRARQSIG AQFGARER