Gene BMAA1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA1006 
Symbol 
ID3086900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand+ 
Start bp1035214 
End bp1036332 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content68% 
IMG OID637564908 
Productthreonine dehydratase, biosynthetic, truncation 
Protein accessionYP_338431 
Protein GI77358938 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1171] Threonine dehydratase 
TIGRFAM ID[TIGR01124] threonine ammonia-lyase, biosynthetic, long form 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGGTGC AGGCCGAGCG CGGCCTCACG TTCGTCCATC CGTTCGACGA TCCGTACGTG 
ATCGCGGGCC AGGGCACGGT CGCGATGGAG ATCCTGCGCC AGCATCAGGG GCCGATTCAC 
GCGATCTTCG TGCCGATCGG CGGCGGCGGG CTCGCGGCGG GCGTGGCCGC GTACGTGAAG 
GCGGTCCGCC CGGAGATCAA GGTGATCGGC GTGCAGACCG ACGATTCGTG CGCGATGAAG 
CAATCGCTCG CGGCGGGCCG GCGCGTCGAG CTCACCGAGG TGGGGCTCTT CTCCGACGGC 
ACCGCGGTCA AGCTCGTCGG CGAGGAGACG TTCCGCCTCT GCGCGGCGTA TCTCGACGAG 
GTCGTGACCG TCGATACCGA CGCGCTTTGC GCGGCGATCA AGGACGTGTT CCAGGACACG 
CGCAGCGTGC TCGAGCCGGC CGGCTCGCTC GCGGTGGCGG GCGCGAAGCG GTATGCGGAG 
CAGGCGGGCA TCGAGGGCGA GACGCTCGTG GCGGTTACCT CCGGCGCGAA CATGAATTTC 
GACCGGATGC GCTTCGTCGC CGAGCGCGCC GAGGTGGGCG AGGCGCGCGA GGCGGTGTTC 
GCGGTGACGA TTCCCGAGGA GCGCGGCAGC TTCAAGCGCT TCTGCGCGCT CGTCGGCGAG 
CGCAACGTGA CCGAGTTCAA CTACCGGATC GCCGATGCGC GATCGGCGCA TCTCTTCGTC 
GGTGTGCAGA TCGGGCATCG CGGCGATTCG GCGACGATCG CGGCGAGCTT CGTCGCGCAC 
GGCTTCGGCA CCGTCGATCT GAGCGGCGAT GAGCTCGCGA AACAGCACGT GCGACACATG 
GTGGGCGGGC GCTCGCCGCT CGCGCACGAC GAGCGGCTGT TCCGCTTCGA GTTTCCCGAG 
CGGCCCGGCG CGCTGATGAA GTTCCTGTTG TCGATGGCGC CCGACTGGAA CATCAGCCTG 
TTCCATTACC GCAATCAGGG CGGCGACGCG AGCTCGATCC TCGTCGGCCT GCAAGTGCCG 
CGGGCGGACC ACGCGGCGTT CGATCGCTTT CTCGCGGCGC TCGGTTATCC GTATCGCGAG 
GAAACCGGTT ATCCCGCCTA TCGGTTGTTT CTCGGTTGA
 
Protein sequence
MKVQAERGLT FVHPFDDPYV IAGQGTVAME ILRQHQGPIH AIFVPIGGGG LAAGVAAYVK 
AVRPEIKVIG VQTDDSCAMK QSLAAGRRVE LTEVGLFSDG TAVKLVGEET FRLCAAYLDE 
VVTVDTDALC AAIKDVFQDT RSVLEPAGSL AVAGAKRYAE QAGIEGETLV AVTSGANMNF 
DRMRFVAERA EVGEAREAVF AVTIPEERGS FKRFCALVGE RNVTEFNYRI ADARSAHLFV 
GVQIGHRGDS ATIAASFVAH GFGTVDLSGD ELAKQHVRHM VGGRSPLAHD ERLFRFEFPE 
RPGALMKFLL SMAPDWNISL FHYRNQGGDA SSILVGLQVP RADHAAFDRF LAALGYPYRE 
ETGYPAYRLF LG