| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA0892 |
|---|
| Symbol | |
|---|
| ID | 3086997 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | + |
|---|
| Start bp | 911155 |
|---|
| End bp | 913824 |
|---|
| Gene Length | 2670 bp |
|---|
| Protein Length | 889 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637564796 |
|---|
| Product | sarcosine oxidase, alpha subunit, truncation |
|---|
| Protein accession | YP_338415 |
|---|
| Protein GI | 77358750 |
|---|
| COG category | [E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase |
|---|
| TIGRFAM ID | [TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGAAGC TCGCGCGCTT CCTGCCGGCG GGCTTCTACT ACAAGACGTT CATGTGGCCG
CGCAATCTGT GGCCGAAGTA CGAGGAGAAG ATCCGCGAGG CGGCCGGCCT CGGCAAGGCG
CCCGACACGC TCGACGCCGA CCGCTACGAC AAGTGCTACG CGCACTGCGA CGTGCTCGTC
GTCGGCGGCG GCCCGACGGG GCTCGCGGCC GCGCATGCGG CGGCCGTCAA CGGCGCGCGC
GTGATCCTCG TCGACGATCA GCGCGAGCTG GGCGGCAGCC TGCTCGCGTG CCGCGCGGAG
ATCGACGGCA AGCCGGCGCT GCAATGGGTC GAGAAGATCG AGGCGGAGCT CGCGAAGCTG
CCCGACGTGA GCATCCTCAC GCGCAGCACC GCGTTCGGCT ATCAGGATCA CAACCTCGTG
ACCGTCGTGC AGCGGCTCAC CGATCATCTG CCGGTGTCGA TGCGCAAGGG CACGCGCGAG
ATGATCTGGA AGGTGCGCGC CAAGCGCGTG ATCCTCGCCA CGGGCGCGCA CGAGCGGCCG
CTCGTGTTCG GCAATAACGA TCTGCCGGGC GTGATGACCG CGTCGGCCGT GTCGGCGTAC
ATCCATCGCT ACGGTGTGCT GCCGGGGCGC GTCGCGGTCG TCGCGACGAA CAACGATCGC
GGCTATCAGT GCGCGCTCGA TCTGAAGGCG TGCGGCGCGA AGGTGACGGT CGTCGATGCG
CGCGCGTCGA CGCGCGGCGC ATTGCCCGCG GTCGCCAAGC GCCACGGCAT CACGGTGATG
AGCGGCGCGG CCGTGTCGGC TGCGGCGGGC AAGCTGCGCG TCGCGTCGGT CGATGTCGTC
TCCTATGCCA ATGGCCGCTC GGGCGGCAAG ATCGCGACGC TGCCGTGCGA TCTGGTCGCG
ATGTCGGGCG GCTTCAGCCC GGTGCTGCAC CTGTTCGCGC AATCGGGCGG CAAGGCGCAC
TGGAACGACG ACAAGGCCTG CTTCGTGCCC GGCAAGCCGG TGCAGGCGGA AGCGAGCGTC
GGCGCGGCGG CCGGCGAGTT CGAGCTCGCG CGCGCGCTGC GGCTCGCGCT CGACGCGGGC
GTCGCCGCGG CGAAATCGGC GGGCTTTGCC GCCGAGCGTC CGCCCGTGCC GAAGCTCGCC
GAGGCGGTGG AGGACGCGCT GCTGCCGTTG TGGCTCGCGA GCGGCGCAGA AGCGGCGGTT
CGCGGTCCGA AGCAGTTCGT CGATTTCCAG AACGACGTCG GCGCGGCCGA CATCCTGCTC
GCCGCGCGCG AAGGTTTCGA ATCGGTCGAG CACGTGAAGC GCTACACGGC GATGGGTTTC
GGCACCGATC AGGGCAAGCT CGGCAACATC AACGGGATGG CGATCCTCGC GCAGGCGCTC
GGCAAGACGA TTCCGGAGAC GGGCACGACG ACGTTCCGCC CGAACTACAC GCCGGTGTCG
TTCGGCGCGT TCGCGGGCCG CGAGCTCGGC GATTTCCTCG ACCCGATCCG CAAGACCTGC
GTTCACGAAT GGCATGTCGA GCACGGCGCG ATGTTCGAGG ACGTCGGCAA CTGGAAGCGG
CCGTGGTACT TCCCGCGCAA CGGCGAGGAT CTGCACGCGG CGGTCAAGCG CGAGTGCCTC
GCGGTGCGCA ACGGCGTCGG CATGCTCGAT GCGTCGACGC TCGGCAAGAT CGATATCCAG
GGCCCGGACG CGGTGAAGCT GCTGAACTGG GTATACACGA ACCCGTGGAA CAAGCTCGAG
GTCGGCAAGT GCCGCTACGG GCTGATGCTC GACGAGAACG GCATGGTGTT CGACGACGGC
GTGACCGTGC GCCTGGGCGA CCAGCACTTC ATGATGACGA CCACCACGGG CGGCGCCGCG
CGCGTGCTCA CGTGGCTCGA GCGCTGGCTG CAGACGGAAT GGCCGGACAT GAAGGTGCGC
CTTTCGTCCG TCACCGATCA CTGGGCGACG TTCGCGGTGG TCGGCCCGAA GAGCCGCCGG
GTCGTGCAGA AGGTGTGCAA GGACATCGAC TTCGCGAACG ACGCGTTCCC GTTCATGAGC
TATCGCGACG GCACGGTCGC CGGCGTGAAG TCGCGCGTGA TGCGCATCAG CTTCTCGGGC
GAGCTCGCGT ACGAAGTGAA CGTGCCGGCG AACGCGGGCC GCGCGGTATG GGAAGCGCTG
ATGGACGCGG GCGCGGAGTT CGACATCACG CCGTATGGCA CCGAGACGAT GCACGTGCTG
CGCGCGGAGA AGGGCTACAT CATCGTCGGT CAGGATACCG ACGGATCGAT CACGCCGTTC
GATCTCGGCA TGGGCGGGCT CGTCGCGAAA TCGAAGGATT TCCTCGGCCG CCGCTCGCTC
ACGCGCGCCG ATACCGCGAA GAGCGGCCGC AAGCAGTTCG TCGGCCTGCT GACCGACGAC
GCGCAGTCTG TTTTGCCCGA AGGCGGCCAG ATCGTCGAGC TCGATGCGGC CGCGCGTGCG
GACGGCACGA CGCCGATGCT CGGTCACGTG ACGTCGAGCT ATTACAGTCC GATCCTGAAC
CGCTCGATCG CGCTCGCGGT CGTGAAGGGC GGATTGAGCC GGATGGGCGA GCGCGTCGCG
GTCTCGCTCG CGAACGGGCG GCGCGTCGCC GCGACGATTT CGAGCCCGGT TTTCTACGAC
ACCGAAGGGG TACGTCAACA TGTGGAATGA
|
|---|
| Protein sequence | MQKLARFLPA GFYYKTFMWP RNLWPKYEEK IREAAGLGKA PDTLDADRYD KCYAHCDVLV
VGGGPTGLAA AHAAAVNGAR VILVDDQREL GGSLLACRAE IDGKPALQWV EKIEAELAKL
PDVSILTRST AFGYQDHNLV TVVQRLTDHL PVSMRKGTRE MIWKVRAKRV ILATGAHERP
LVFGNNDLPG VMTASAVSAY IHRYGVLPGR VAVVATNNDR GYQCALDLKA CGAKVTVVDA
RASTRGALPA VAKRHGITVM SGAAVSAAAG KLRVASVDVV SYANGRSGGK IATLPCDLVA
MSGGFSPVLH LFAQSGGKAH WNDDKACFVP GKPVQAEASV GAAAGEFELA RALRLALDAG
VAAAKSAGFA AERPPVPKLA EAVEDALLPL WLASGAEAAV RGPKQFVDFQ NDVGAADILL
AAREGFESVE HVKRYTAMGF GTDQGKLGNI NGMAILAQAL GKTIPETGTT TFRPNYTPVS
FGAFAGRELG DFLDPIRKTC VHEWHVEHGA MFEDVGNWKR PWYFPRNGED LHAAVKRECL
AVRNGVGMLD ASTLGKIDIQ GPDAVKLLNW VYTNPWNKLE VGKCRYGLML DENGMVFDDG
VTVRLGDQHF MMTTTTGGAA RVLTWLERWL QTEWPDMKVR LSSVTDHWAT FAVVGPKSRR
VVQKVCKDID FANDAFPFMS YRDGTVAGVK SRVMRISFSG ELAYEVNVPA NAGRAVWEAL
MDAGAEFDIT PYGTETMHVL RAEKGYIIVG QDTDGSITPF DLGMGGLVAK SKDFLGRRSL
TRADTAKSGR KQFVGLLTDD AQSVLPEGGQ IVELDAAARA DGTTPMLGHV TSSYYSPILN
RSIALAVVKG GLSRMGERVA VSLANGRRVA ATISSPVFYD TEGVRQHVE
|
|---|
| |