Gene BMAA0880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0880 
SymboluvrB 
ID3086196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand
Start bp901786 
End bp903876 
Gene Length2091 bp 
Protein Length696 aa 
Translation table11 
GC content64% 
IMG OID637564784 
Productexcinuclease ABC subunit B 
Protein accessionYP_105572 
Protein GI53717211 
COG category[L] Replication, recombination and repair 
COG ID[COG0556] Helicase subunit of the DNA excision repair complex 
TIGRFAM ID[TIGR00631] excinuclease ABC, B subunit 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGAAC ACCACTCCGA CACCCGTGAC GATCTAGACG AATCGAAATT CGTGACGTTC 
GAAGGTTCTC CGTTTCAGCT GTATCAGCCT TATCCGCCGT CGGGCGACCA GCCCACCGCG
ATCGCGACGC TCGTCGAAGG CGTCGAGGAT GGCTTGTCGT TCCAGACGCT GCTCGGCGTG
ACGGGCTCCG GCAAGACCTA CACGATGGCG AACACGATCG CGCGGCTCGG CCGTCCGGCG
ATCGTGTTCG CGCCGAACAA GACGCTCGCC GCGCAGTTGT ACGCGGAGTT CCGCGAGTTT
TTCCCGCGCA ACGCGGTCGA GTACTTCGTG TCGTACTACG ACTACTACCA GCCGGAAGCG
TACGTGCCGC AGCGCGATCT CTTCATCGAG AAGGATTCGT CGATCAACGA GCACATCGAG
CAGATGCGGC TGTCGGCGAC GAAGAGCCTG ATGGAGCGGC GCGATGTCGT GATCGTCGCG
ACGGTGTCGG CGATCTACGG TATCGGCAAT CCGTCCGAAT ACCACCAGAT GATCCTCACG
CTGCGCACGG GCGACAAGAT CGGCCAGCGC GAGGTGATCG CGCGGCTGAT CGCGATGCAG
TACACGCGCA ACGAGCAGGA CTTCCAGCGC GGCACGTTTC GCGTGCGCGG CGACACGATC
GACATCTTCC CGGCCGAGCA CGCGGAGATG GCGGTGCGCG TCGAGCTGTT CGACGACGAA
GTCGATACGC TGCACCTGTT CGATCCGCTG ACGGGGCGCG TGCGGCAGAA GATTCCGCGC
TTCACCGTCT ATCCGTCGTC GCACTACGTG ACGCCGCGCG AGACTGTGAT GCGCGCGGTC
GAGACGATCA AGGACGAATT GCGCGAGCGT CTCGAATTCT TCCATCGCGA CGGCAAGCTC
GTCGAGGCGC AGCGCCTCGA GCAGCGCACC CGGTTCGACC TCGAGATGCT GCAGGAGCTC
GGCTTCTGCA AGGGCATCGA GAATTATTCG CGGCACTTCT CCGGCGCGGC GCCGGGCGAG
CCGCCGCCGA CCCTCGTCGA CTATCTGCCG CCCGACGCGC TGATGCTGCT CGACGAATCG
CACGTGCTGA TCGGCCAGTT GAACGGCATG TACAACGGCG ATCGCGCGCG CAAGGAAAAC
CTCGTCGATT ACGGGTTCCG GCTGCCGTCG GCGCTCGATA ACCGGCCGCT CAAGTTTCCC
GAGTTCGAGC GCAAGATGCG CCAGGTGGTG TTCGTGTCGG CGACGCCCGC CGACTACGAG
CAGCGCGTGT CCGGCCAGAC CGCCGAGCAG GTCGTGCGGC CGACCGGGCT CGTCGATCCG
CAGATCGAGG TGCGCCCGGC GAGCACGCAG GTGGACGACG TGCTCTCCGA GATCACCGAG
CGGGTGAAGG CGAACGAGCG CGTGCTGATC ACCGTGCTCA CGAAGCGCAT GGCCGAGCAA
TTGACCGAAT TCCTCGCCGA CCACGGGGTC AAGGTCCGCT ATCTGCACAG CGACATCGAC
ACCGTCGAGC GCGTCGAGAT CATCCGAGAC CTGCGGCTCG GCACGTTCGA CGTGCTGGTC
GGGATCAACC TGCTGCGCGA GGGCCTCGAC ATTCCGGAAG TGTCGCTCGT CGCGATTCTC
GATGCGGACA AGGAGGGCTT CCTGCGCGCC GAGCGCTCGC TGATCCAGAC GATCGGCCGC
GCGGCGCGCA ACGTGAACGG CAAGGCGCTC CTGTACGCGG ACCGGATCAC CGATTCGATG
CGCCGCGCGA TCGACGAGAC CGAGCGCCGC CGCGCAAAGC AGATCGCATA CAACGAAAAG
ATGGGCATTA CGCCGCGCGG CGTCGTGAAG CGGATCAAGG ACATCATCGA TGGCGTGTAC
AACGCCGACG AGGCGCGCGC CGAGCTGAAG GAGGCGCAGC AGCGCGCGAA ATTCGAGGAC
ATGTCCGAGA AGCAGATCGC GAAGGAAATC AAGCGGCTCG AAAAGCAGAT GGCCGATTAC
GCGAAAAATC TCGAGTTCGA GAAAGCCGCG CAGACGCGCG ACCAGCTCGC GCTGCTGCGC
GAACGGGTGT TCGGCGCGAA TGTCGGCGAT CACGTGAGCG GGGGCGAGTG A
 
Protein sequence
MSEHHSDTRD DLDESKFVTF EGSPFQLYQP YPPSGDQPTA IATLVEGVED GLSFQTLLGV 
TGSGKTYTMA NTIARLGRPA IVFAPNKTLA AQLYAEFREF FPRNAVEYFV SYYDYYQPEA
YVPQRDLFIE KDSSINEHIE QMRLSATKSL MERRDVVIVA TVSAIYGIGN PSEYHQMILT
LRTGDKIGQR EVIARLIAMQ YTRNEQDFQR GTFRVRGDTI DIFPAEHAEM AVRVELFDDE
VDTLHLFDPL TGRVRQKIPR FTVYPSSHYV TPRETVMRAV ETIKDELRER LEFFHRDGKL
VEAQRLEQRT RFDLEMLQEL GFCKGIENYS RHFSGAAPGE PPPTLVDYLP PDALMLLDES
HVLIGQLNGM YNGDRARKEN LVDYGFRLPS ALDNRPLKFP EFERKMRQVV FVSATPADYE
QRVSGQTAEQ VVRPTGLVDP QIEVRPASTQ VDDVLSEITE RVKANERVLI TVLTKRMAEQ
LTEFLADHGV KVRYLHSDID TVERVEIIRD LRLGTFDVLV GINLLREGLD IPEVSLVAIL
DADKEGFLRA ERSLIQTIGR AARNVNGKAL LYADRITDSM RRAIDETERR RAKQIAYNEK
MGITPRGVVK RIKDIIDGVY NADEARAELK EAQQRAKFED MSEKQIAKEI KRLEKQMADY
AKNLEFEKAA QTRDQLALLR ERVFGANVGD HVSGGE