Gene BMAA0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0858 
Symbol 
ID3086815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand+ 
Start bp881685 
End bp882545 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content76% 
IMG OID637564762 
ProductABC transporter, permease protein 
Protein accessionYP_338412 
Protein GI77358920 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID[TIGR03255] 2-aminoethylphosphonate ABC transport system, membrane component PhnV 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.0144911 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGCTG ATTTCCCGGC TCGCGCCGCG CCGGTGCCGC GCCGCGAGCT GCGCTGGACC 
GATGCGGCCT CGCGCGTCGC CTCGCGTGCG CTCGTCGCGC TCGCGGCCGC CGCCTGCTGC 
TGGCTGTTCG TGCTGCCCGT CGTCGTCGTC GCGCTGTCGA GCGTCGCCGG GCACTGGTCG 
GGCACGATCC TGCCGGCGGG CTACAGCCTG CGTTGGTTCG AGCGCCTCGG CCGGCCCGAA 
TTCGACGCGC TCGCCGCGAG CCTCGAGATC GGGCTCGGCG TCGCCGCGCT CGGCACCGCG 
CTCGGCGTCG CGCTGGCGCT CGCGCTCGCG CTCGAAGGCC GCACGCGGCG CGGCGTCGGT 
GCGCTCGTCG ACGCGCTCGT GATGCTGCCC AACGGCGTGC CGAGCGTCGT GCTCGGGCTC 
GCGGTGCTGA TCGCGTATCA CGCGAAGCCC GTCGACCTGT CGAGCTCGCC CGCGATCGTC 
GTGTTCGTGC AGCTCGCGCT CGTGCTGCCG TTCTGCTACC GGTGCGCGGC CGCCGCGCTG 
CGCCCCGAGC TGACCGTGCT GCGCGAGGCG GCCGCGAGCC TCGGCGCGCC GCCCGCGATG 
GTGCTGCGCC GCGTGCTGCT GCCGCAGCTC GTGCCGGCGA TCCGCGCGAG CCTCGCGCTC 
GGCTTCGCGC TGTCGCTCGG CGAGCTCGGC GCGACGCTGA CTGTCTATCC GCCGGGCTTC 
GCGACCGTGC CGATCGTCGT GATCGGCGCG GTCGAGCGCG GCTACTACCT GCCCGCGTCG 
GCGCTGTCGC TGCTGCTGCT CGGCGCGTCG CTCGTCGCGC TCATCGCGAT CGCGGCGCGC 
GCGCCGCGGC CGGCGCGATG A
 
Protein sequence
MSADFPARAA PVPRRELRWT DAASRVASRA LVALAAAACC WLFVLPVVVV ALSSVAGHWS 
GTILPAGYSL RWFERLGRPE FDALAASLEI GLGVAALGTA LGVALALALA LEGRTRRGVG 
ALVDALVMLP NGVPSVVLGL AVLIAYHAKP VDLSSSPAIV VFVQLALVLP FCYRCAAAAL 
RPELTVLREA AASLGAPPAM VLRRVLLPQL VPAIRASLAL GFALSLGELG ATLTVYPPGF 
ATVPIVVIGA VERGYYLPAS ALSLLLLGAS LVALIAIAAR APRPAR