| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA0742 |
|---|
| Symbol | |
|---|
| ID | 3086253 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | - |
|---|
| Start bp | 759926 |
|---|
| End bp | 760435 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 637564652 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_338391 |
|---|
| Protein GI | 77358963 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3157] Hemolysin-coregulated protein (uncharacterized) |
|---|
| TIGRFAM ID | [TIGR03344] type VI secretion system effector, Hcp1 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0853186 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCCG GAATATATCT CAAGGTCAAA GGAAAAACCC AGGGGGAAAT CAAAGGCTCC
GTCGTTCAGG AAGGTCATGA CGGGAAGATC CACATCCTCG CCTTCAAGAA CGACTACGAC
ATGCCCGCCA GGCTCCAGGA AGGCCTGACG CCCGCCGCCG CCGCTCGCGG CACGATCACG
TTGACGAAGG AAATGGACAG ATCGTCGCCG CAATTCCTGC AGGCGCTCGG CAAGCGCGAG
ATGATGGAAG AGTTCGAGAT CACGATCCAC CGTCCGAAGA CGGATACAAC AGGTGGGGAC
CTGACCGAAC TCCTGTTCAC GTACAAGTTC GAAAAAGTGC TGATCACCCA CATGGACCAA
TACTCGCCCA CGCCGCACAA AGACGATAGC AACGGCATCA AGGAAGGCTT GCTCGGCTAT
ATCGAGGAGA TCAAGTTCGC GTATTCGGGA TACTCGTTGG AACACGCGGA ATCGGGCATC
GCGGGCGCCG CAAACTGGAC GAATGGCTGA
|
|---|
| Protein sequence | MLAGIYLKVK GKTQGEIKGS VVQEGHDGKI HILAFKNDYD MPARLQEGLT PAAAARGTIT
LTKEMDRSSP QFLQALGKRE MMEEFEITIH RPKTDTTGGD LTELLFTYKF EKVLITHMDQ
YSPTPHKDDS NGIKEGLLGY IEEIKFAYSG YSLEHAESGI AGAANWTNG
|
|---|
| |