Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA0680 |
Symbol | |
ID | 3086528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | - |
Start bp | 687094 |
End bp | 689922 |
Gene Length | 2829 bp |
Protein Length | 942 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637564593 |
Product | penicillin-binding protein |
Protein accession | YP_105427 |
Protein GI | 53717486 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGGGT TGGCGTCGAC GCTCGCGCGG CGGGCCGCGC AGGCGGCCGT GCCGCGATGG GTTTGGCCGT TCGCCCGACC GGCCGGGTGG TCGCTCGGTT CGGTGTTCGG TTCGGTGTTC GGTTCGGTGT TCGGTTCGGT GTTCGGTCCA GCGTTCGGTC CGGCGTTCGG TCCGGCGTTC GGTTCGGCGT TCGGTTCGGC GTTCGGTCCG GCGTTCGGTC CGGCGTTCGG TCCGGCGTTC GGTCCGGCGT TCGGTTCGGC GTTCGGTTCG GCGTTCGGTT CGGTGTTCGG TTCGGCGTTC GGTTCGGCGT TCGCGGCGTT CGGTCTCGCG CTCGCCCCCC TGCTCGCCGC GCCGCCCGTT CGGCCGCGCG CCCGGCGGAA CCCGCGCCCG TGCGGCTCGC CGCGGCGCGC GGCGCTCCCG CGCGCGCGAA CGACGGCGAG CCGCACGCTC GCCGTCGCGA TGCTCGCCGC GCCGCTCGCC GCGCACGCGC TGCCGGCCTA CGACGACGTG CGGCGCGACT GGCGCAGCAC CGACTGGTTG CTGCTCGCAC GCGACGGCAC GCCGCTTCAG CGCACGCGCG TGGAGCTCAC CGAGCGGCGC GGCGACTGGA TCGCGCTCGC CGACGTATCG CCCGCGTTTC GAGAGGCGAT CGTCGTATCG GAGGACAAGC GCTTCTACGC GCACAGCGGC GTCGACTGGC GCGGCATCGC GGGCGCCGCA TGGGGCAATC TGTGGAACGA GCGCACGCGC GGCGCGTCGA CGGTGACGAT GCAGCTCGCC GGCCTGCTGA GCGACACGCC GCGCCGCTCG GGCCAGCGCT CGCTGCCGCA GAAGGCCGCG CAGGCGATGA ACGCGCTGCG GCTCGAACGC GGCTGGCGCA AGGATCAGAT CCTCGAGGCG TATCTGAATC TCGTGCCGTT TCGCGGCGAG ACGGTCGGGC TCGACGCGAT GTCGCACGCG CTGTTCGGCA AGGCGCCGTC GGGGCTCGAC GTGCGCGAAT CGGCGGTGGC CGCCGCGCTC GTGCGCGCGC CGAACGCGTC CGCCGCGAAA GTGGCCGAAC GCGCGTGCCG GATCCTGCGC GACCTGCGCG CCGCGCAACC GTGCGAATCG CTCGACGGCT ACGTGCGCTT CGTGACGTCC GCCCCGCCGG GCGCCGCGCG CGACGGCGGC GAAGCGCTCG CGCCGCACTT CGCGCGGCGC GTCGCGGCCG AGGTGAAGCC CGGCGCGGGC GCGCGCGTGC GCTCCACGCT CGACGCGCCG CTGCAGCGCT TCGCGCGCGA CACGCTCACG CGCGCGCTCG CCGAGCTCAA CGCGCCCGCC CATCGGCGCC ACGTGCAGGA CGGCGCGGTC GTCGTGATCG ACAACGCGAC GGGCGAGATC CGCGCATGGG TCGGCTCGTC GGGCGCGCTG TCGGCCGCGC GCGACGTCGA CGCGGTGCTC GCGCCGCGCC AGGCCGGCTC GACGCTCAAG CCGTTCCTCT ACGCGCAGGC GCTCGACGAA CGGCGCCTCA CCGCCGCTTC GCTGCTCGAC GACGCGCCGA TCGATCTCGC CGCGGGCGGC GGCCTGTACA TCCCGCAGAA CTACGACAAG CACTTCAAGG GCTGGGTCAG CGTGCGCACC GCGCTCGGCG GATCGCTGAA CGTGCCGGCC GTGCGCACGC TCGTGCTCGT CACGCCGCAC CGCTTCGCGC GCACGCTCAC CGCGCTCGGG CTGCCGCTCG CCGAAGAAGG CGATTACTAC GGTTTCAGCC TCGCGCTCGG CAGCGCCGAC GTCACGCTGC TGTCGCTCGC GAACGCGTAC CGCGCGCTCG CCAACGGCGG CGTCGCGCGG GCGACGCTCG ACGTGCCGGG CGGAAGCGGA AGCCGGAACG GAAACGGAAA CGGAAACGGA AATGACGCCG TCACGTCGGC CCCGTTCGCG CCGACCGTTT CGAAATCAAA GGTTGGCGCG TCAGCGGTTT TCCCGCGGGC CGTCTCGACG AAGGCCGAGC CCGCGAAGCC AGTGCCCACG GCGGCCCTTT CCCCCACGAG CGCTTCGACA TCGACCGCCG GCAAGCCGGC GGCGCACGCC GCAGCGGGCA CGCGCGTATT CAGCGAAGCC GCGGCGTACA TCGTCACCGA CATCCTCGCC GACAACAACG CGCGCGTGCG CACGTTCGGC TTCGACAGCC CGCTCGCGAC GCGCTTCTTC TCCGCCGTCA AGACGGGCAC GAGCAAGGAC ATGCGCGACA ACTGGGCGCT CGGCTACACG TCGCGCTACA CGGTGGGCGT GTGGGTGGGC AACGCGGACG GCTCGCCGAT GTGGGACGTA TCGGGCGTCA CGGGCGCGGC GCCCGTGTGG GCCGCGATCG TCGGCTATCT GCACCGCGAT CTCGCGAGCC GCGCGCCGCG CCCGCCCGCC GGCGTCGAGC AGCGCCGCGT CGCGTTCGAA CGCGACGTCG AGCCCGCGCG CCCCGAGTGG TTCATCGCCG GCACCGCGCT CGACACGGTG CGCCTCGCCG CGCCCGCGAC CGCCGCCGCG GGCGGCGCAG ACCGGCCGCG CGCGCCGCTT TCGATCGGCG CGCCGACCGA CGGCACGATC TTCGCGATCG ATCCGGACAT CCCGCCGAAG CACCAGCGAA TCTGGTTCGA GCGCGCGGCG GGGCGCGCGG CGCGCTTCTC GTGGCGGCTC GACGGCAAGG TGATCGGCCG CGGCGAGCGC CTCGCGTGGA TGCCGTGGCC GGGATCGCAC CGGCTCGAGC TCGTCGACGC GCGCGGCAAC GTCGCCGACG CGGTCGGCTT CGAGGTGCGC GGCGCGTTCG CGAAGACGGC GGCCCCACCG AAGCCGTGA
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Protein sequence | MNGLASTLAR RAAQAAVPRW VWPFARPAGW SLGSVFGSVF GSVFGSVFGP AFGPAFGPAF GSAFGSAFGP AFGPAFGPAF GPAFGSAFGS AFGSVFGSAF GSAFAAFGLA LAPLLAAPPV RPRARRNPRP CGSPRRAALP RARTTASRTL AVAMLAAPLA AHALPAYDDV RRDWRSTDWL LLARDGTPLQ RTRVELTERR GDWIALADVS PAFREAIVVS EDKRFYAHSG VDWRGIAGAA WGNLWNERTR GASTVTMQLA GLLSDTPRRS GQRSLPQKAA QAMNALRLER GWRKDQILEA YLNLVPFRGE TVGLDAMSHA LFGKAPSGLD VRESAVAAAL VRAPNASAAK VAERACRILR DLRAAQPCES LDGYVRFVTS APPGAARDGG EALAPHFARR VAAEVKPGAG ARVRSTLDAP LQRFARDTLT RALAELNAPA HRRHVQDGAV VVIDNATGEI RAWVGSSGAL SAARDVDAVL APRQAGSTLK PFLYAQALDE RRLTAASLLD DAPIDLAAGG GLYIPQNYDK HFKGWVSVRT ALGGSLNVPA VRTLVLVTPH RFARTLTALG LPLAEEGDYY GFSLALGSAD VTLLSLANAY RALANGGVAR ATLDVPGGSG SRNGNGNGNG NDAVTSAPFA PTVSKSKVGA SAVFPRAVST KAEPAKPVPT AALSPTSAST STAGKPAAHA AAGTRVFSEA AAYIVTDILA DNNARVRTFG FDSPLATRFF SAVKTGTSKD MRDNWALGYT SRYTVGVWVG NADGSPMWDV SGVTGAAPVW AAIVGYLHRD LASRAPRPPA GVEQRRVAFE RDVEPARPEW FIAGTALDTV RLAAPATAAA GGADRPRAPL SIGAPTDGTI FAIDPDIPPK HQRIWFERAA GRAARFSWRL DGKVIGRGER LAWMPWPGSH RLELVDARGN VADAVGFEVR GAFAKTAAPP KP
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