Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA0587 |
Symbol | |
ID | 3086185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | + |
Start bp | 594954 |
End bp | 596051 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637564504 |
Product | putative outer membrane porin |
Protein accession | YP_105347 |
Protein GI | 53717268 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCGAA AGAGTCTGGC GATGGCGGTG GCGGGTATCG GGATCGGCGC GGCGGTGCCG CCGGCGCTCG CGCAATCGAG CGTGACGCTG TACGGCATCG TCGATTCCGG CATCACGTAC ACGAACAACC AGAAGGGGCA TTCTGCCTGG AAGGCGACGA GCGGCAATGA GCAGGCCGCC CGCTGGGGGC TTGTCGGGCG CGAGGATCTC GGCGGCGGCA CGAGCGCGAT ATTCCGGCTC GAGAACGGCT TCGACATCGA GAACGGTACG GCGAGCCAGG GCGGTCGGCT GTTCGGACGT CGCACGTACA TCGGATTGGC GAACGATCGC TGGGGCGCGT TCACGATGGG CCGTCAGTAC AACGCGGTGC AGGAAACGCT GGCTCCGCTG CATATCGCAA CCGTACTCGG AAGATACGCA CATCATCCGT TTGATGCCGA CGACCTGGAC AGTACGTTTC GCACGAACAA TTCGGTCCAG TACCAGACGC CCGATTGGGG CGGCGTGCGC GCGATCGCGA CGTACGGCTT CTCGAACTCG ACGTCGTTCG CGCGGAACCG CACATGGAGC GTCGGGGCGA GCTATGCGCG CGGCCCGCTG CAACTCGCCG CCGCATACGT GCGCGTCGAC TATCCGGCGA TCGATGCGAC CGGCGCGATC GCGTCCGACA ATTACTACGG GTTCGTCAAG GGCGTCGCGC GGCAGCAGAT CTGGGGCGCG GGCGGCGCGT ACGCGTGGGG CGGCGCGACC TTCGGGCTGT TGTATACGAG CGCGCTGTTC AGTCTGCAGA CGGGCGGCGC CGAGCGCTTC AACAATTTCG AGGGCAGCGT GCGCTACCGC GTGACGCCCG CGGTGCAGGT CGCGCTCGGC GAGACGTACA CGCAGGTGCT CGCGTCGCAC GCGGCCGCGC ATGACGCGCA CTATCTGCAG ACGAGCGCGG GGATCCAGTA TTTCCTGTCG AAGCGCACGG ACGTCTATTT GAACGTGTCC TATCAACGGG CATCGTCGAA TGCCGTGGCG TGGATCAAGG GGCTTGACGG GGCATCGAGC ACGCGCACGC AGATCGTCGC GGTGACGGGC ATCCGGCACA AGTTCTGA
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Protein sequence | MKRKSLAMAV AGIGIGAAVP PALAQSSVTL YGIVDSGITY TNNQKGHSAW KATSGNEQAA RWGLVGREDL GGGTSAIFRL ENGFDIENGT ASQGGRLFGR RTYIGLANDR WGAFTMGRQY NAVQETLAPL HIATVLGRYA HHPFDADDLD STFRTNNSVQ YQTPDWGGVR AIATYGFSNS TSFARNRTWS VGASYARGPL QLAAAYVRVD YPAIDATGAI ASDNYYGFVK GVARQQIWGA GGAYAWGGAT FGLLYTSALF SLQTGGAERF NNFEGSVRYR VTPAVQVALG ETYTQVLASH AAAHDAHYLQ TSAGIQYFLS KRTDVYLNVS YQRASSNAVA WIKGLDGASS TRTQIVAVTG IRHKF
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