Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA0526 |
Symbol | |
ID | 3086207 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | + |
Start bp | 535569 |
End bp | 537398 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637564444 |
Product | PDZ domain-containing protein |
Protein accession | YP_105294 |
Protein GI | 53717356 |
COG category | [R] General function prediction only |
COG ID | [COG3975] Predicted protease with the C-terminal PDZ domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCCGA TTCGCTACAC GATCGTTCCG AAAGATCCCG CCGCGCACCT GTTCGAGGTG ACGCTCACGC TTGCCGATCC GGACCCGGCG GGCCAGCGCT TCGCGCTGCC CGTATGGATT CCGGGCAGCT ATATGGTGCG CGAGTTCGCG CGCAATATCG TGACGCTGCG TGCGTTCAAC GAAGCGGGCC GCAAGCTGCG GATCGGCAAG CTCGACAAGC AGACCTGGCA GGCCGCGCCG GCGCCCGGGC CGATCACGCT GCGCTACGAC GTCTACGCGT GGGACCTGTC GGTGCGCGCC GCGCACCTGG ACGACACGGG CGGCTTCTTC AACGGCACGA GCGTGTTTCT CGCGCCGCTC GGCCGCGAGG ATGCGCCGTG CGAGGTAATG ATCGAGCGGC CGGCGGGCGA CGCGTACCGG CGCTGGCGCG TCGCGACCGC GCTGCCGGAG GCGCGCGGCA CGAAACGCTA CGGCTTCGGC GCGTACCGCG CGGAGAATTA CGACGAGCTG ATCGATCATC CGGTCACGCT CGGCGAATTC GTGCTCGCGT CGTTCGACGC GCACGGCGTG CCGCACGATA TCGCGATCGC GGGCCGCGTG ACCGGGCTCG ATCTCGAGCG GCTCGCGGCC GACCTGAAGC GGGTGTGCGA GGCGCAGATC GCGCTGTTCG AGCCGAAGAC CCGGCGCGCG CCGATGTCGC GCTACGTGTT CATGACGCAG GCGGTCAGCG ACGGCTACGG CGGGCTCGAG CATCGCGCGT CGACGGCGCT CGTCTGCAAT CGCACCGATC TGCCGGTGAA GGGGCGCCCT GAGAAGACGG ACGGCTATCG GACTTACCTT GGCCTGTGCA GCCACGAGTA CTTCCATACA TGGAACGTGA AGCGGATCAA GCCGGCCGCG TTCGCGCCGT ACGATCTGTC GCAGGAGAAT TACACGTCGC TGCTGTGGCT CTTCGAGGGC TTCACGTCGT ACTACGACGA CCTGATGCTC GCGCGCAGCG GCCTCATCTC GCAGGACGAC TATTTCGCGC TCGTCGGCCG CACGATCGCC GGCGTGCAGC GCGGCGCCGG CCGGCTCAGG CAGAGCGTCG CCGAAAGCTC GTTCGATGCG TGGATCAAGT ATTACCGGCA GGACGAAAAC GCGACGAACG CGATCGTCAG CTATTACACG AAGGGCTCGC TCGCCGCGCT CGCGTTCGAT CTGGCGATTC GCGCGCGCAG CCGCCACCGC AAATCGCTCG ACGACGTGAT GCGGCTTCTG TGGCAGCGCT TCGGGCGCGA CTTCTACCAC GGCAAGCCGC AAGGCGTCGG CGAGGACGAC GTGAAGGCGC TGATCGCCGA AGCGACGGGT GTCGATCTCG GCCGTCTTTT CGACGAAGCG GTGTCCGGCA CGCGCGATCT GCCGCTCGCC GAACTCTTCG AGCCGTTCGG CGTGACGCTC GCGCCGGACG GGGGCGCGGG CGGCGCGGCC GATGCGCCCG CGAAGCCGAC GCTCGGCGCG CGCACGCGCG GCGGCGCGGA ATGCACGCTC GCGGCCGTCT ACGAAGGCGG CGCCGCGCAT CGGGCCGGGC TGTCCGCGGG CGACGCGCTC GTCGCGATCG ATGGGCTGCG CGTGACGGGC TCGAACCTCG ACGCGCTGCT CGCGCGCTAC CGCGTCGGCG ACAAGGTCGA GATCCACGCA TTCCGGCGCG ACGAACTGCG CGTGGTGCAG CTCAAGCTCG ACGGCCCGGA CATCGCGCGC TACAAGCTGG CCGCTCAGCC GAAGCCCGCG GCCGCGCGCG CCCGTCGCGA CGCGTGGCTC GGGCTGCCGG CGGCGCGCGG CGGTCGATAA
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Protein sequence | MKPIRYTIVP KDPAAHLFEV TLTLADPDPA GQRFALPVWI PGSYMVREFA RNIVTLRAFN EAGRKLRIGK LDKQTWQAAP APGPITLRYD VYAWDLSVRA AHLDDTGGFF NGTSVFLAPL GREDAPCEVM IERPAGDAYR RWRVATALPE ARGTKRYGFG AYRAENYDEL IDHPVTLGEF VLASFDAHGV PHDIAIAGRV TGLDLERLAA DLKRVCEAQI ALFEPKTRRA PMSRYVFMTQ AVSDGYGGLE HRASTALVCN RTDLPVKGRP EKTDGYRTYL GLCSHEYFHT WNVKRIKPAA FAPYDLSQEN YTSLLWLFEG FTSYYDDLML ARSGLISQDD YFALVGRTIA GVQRGAGRLR QSVAESSFDA WIKYYRQDEN ATNAIVSYYT KGSLAALAFD LAIRARSRHR KSLDDVMRLL WQRFGRDFYH GKPQGVGEDD VKALIAEATG VDLGRLFDEA VSGTRDLPLA ELFEPFGVTL APDGGAGGAA DAPAKPTLGA RTRGGAECTL AAVYEGGAAH RAGLSAGDAL VAIDGLRVTG SNLDALLARY RVGDKVEIHA FRRDELRVVQ LKLDGPDIAR YKLAAQPKPA AARARRDAWL GLPAARGGR
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