Gene BMAA0489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMAA0489 
Symbol 
ID3087981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006349 
Strand- 
Start bp502502 
End bp503512 
Gene Length1011 bp 
Protein Length336 aa 
Translation table11 
GC content67% 
IMG OID637564408 
ProductAraC family transcriptional regulator 
Protein accessionYP_105261 
Protein GI53717094 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGCTTG CCTGCTTGCG CCTTGCTTGC TACGCTCGGC CGATCGTTTC GCGAGCGTGC 
GCGCCCATGC CAGAAGAATT TCATTTCCTG CTGATGCCCG GCTTCTCCGC GCTCGGCTTC 
ATGTCGGCTG TCGAGCCGCT GCGCGTCGCG AACCGCTTCA GGCCGAACCT GTACCACTGG 
CGCATCGTGA GCTGCGACGG CGCGCCCGTC GTCGCGAGCA ACGGCATCTC ACTGAACGCG 
GACGCCGCAT TCGCGCAGGT CGAGCATGCG CACACGATCT TCGTGATCGC CGGCTTCGAT 
CCGCTCGCGC GCTACACGCG CGCGCTCGGC GACTGGCTCA GGCGCGAGTA TCGGCAAGGC 
GCGACGGCGG GCGGCATCGA TACCGGCAGC TTCGTGCTCG CGGAAGCGGG GCTCTTCGAC 
GCGTCGCATG CGCTGACGCT GCACTGGGAA GCGCTCGCCG CGTTCCAGGA GCGCTACCCG 
CACCTGAAGA CCACGCAGGA ACTGTTCGAG ATCGACGCGC GACGCATCAC GTGCGCGGGC 
GGCACCGCGT CGATCGACAT GATGCTCGAC CTGATCGGCC GCCGGCACGG CGCCGAGCTC 
GCCGCGACGA TCTCCGAGCA GTTCGTGCTG AGCCGGATCC GCCAACGCTC CGATCGCCAG 
CGCCTCGAGA TCGCCGCGCG CTACGGCGTG CACAACCGCA AGCTGATCCA GGTGATCGGA 
ACCATGGAGC ACCACATCGA AAGCCCGCTG TCGTCCGACG CGCTCGCGCG GGAGGTGGGC 
ATCACGCGCC GCCAGCTCGA GCGGCTGTTC AGCACGATGC TCGACGATAC GCCGGCACGT 
TTCCATTTGC GGCTGCGGCT CAAGCGTGCG CGCGAACTGC TTCAGCAGAC CGACATGACG 
GTCGCGGCCG TATGCGCGGC GTGCGGATTC GAATCGCCTT CGCATTTTTC CCGCACCTAT 
CGCGCGCAAT TCGGCACAAG CCCGAGAAGC GACCGGCATA CGTCGCGTTG A
 
Protein sequence
MLLACLRLAC YARPIVSRAC APMPEEFHFL LMPGFSALGF MSAVEPLRVA NRFRPNLYHW 
RIVSCDGAPV VASNGISLNA DAAFAQVEHA HTIFVIAGFD PLARYTRALG DWLRREYRQG 
ATAGGIDTGS FVLAEAGLFD ASHALTLHWE ALAAFQERYP HLKTTQELFE IDARRITCAG 
GTASIDMMLD LIGRRHGAEL AATISEQFVL SRIRQRSDRQ RLEIAARYGV HNRKLIQVIG 
TMEHHIESPL SSDALAREVG ITRRQLERLF STMLDDTPAR FHLRLRLKRA RELLQQTDMT 
VAAVCAACGF ESPSHFSRTY RAQFGTSPRS DRHTSR