| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMAA0412 |
|---|
| Symbol | |
|---|
| ID | 3086984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006349 |
|---|
| Strand | + |
|---|
| Start bp | 407699 |
|---|
| End bp | 408727 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637564335 |
|---|
| Product | YD repeat-containing protein |
|---|
| Protein accession | YP_105200 |
|---|
| Protein GI | 53716605 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3209] Rhs family protein |
|---|
| TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0858889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCGATC CGGCGGGGCG GACGACGGCT TGGGAATATG ACGCGTATGG CAGTTTGCTT
GTGCAGACGT TGCCGGATGG CAGCGCAGTC AGAACGGAAT TTGACCTCGA TCACCGACCG
GTCTGCATGA CGTTGATAGG CGGCCGGCAG TGGGGCTACG AGTGGAATAC GTTCGGTAAT
CTGCTCGCGC AGAGCGATCC ATCGGGGGCG ATATCTCGCT ATACCTATGA CGAGTACGGC
CAGCTTGTTG AGCATACTGG GCCGCGTGGT GCGAGCACAC GGTTCGATTA TCACCCGGAC
GGCAATCTCG CGGCGCAGAT CGATGCGTTG GGGCATCGCA CGCAGTATCG GTACGATGCG
CGCGGCTACC TCGGCGAAGC AATCGATGCG CTCGGACAGC AAAGCCAATA CGAGTACGAC
CGCAACGGCC ATCTGACGCG CGCAATCGAG CCGGGCGGGC GTGAGATTCA CTGTGCGTAC
GACGCCGATG GAAATCTGTC TCGCCATCGT GACCCCATGG GCCACGTGAC GCAGATGGAG
TACTCGGCGC TCGGACAGGT CAGCAGACGG CTCGCGCCCG ACGGCACCAC CGTTGAATAC
CGCTACGACA CGGAAGAACA ACTGATCGGC GTCGTGAACG AACGCAGCGA ACTATACGCG
CTCGAACGCG ATGCGCTGGG GCGGATCGTC GTGGAGACGG ACTACTGGGG GCAAGCGCGA
CGCTATCGGT ATGGCGCGGC GGGTGAACTG CTTTGTAGCA CTGATCCTCT GGGGCAGACA
GTCGAATACC GATACGATTG GCTGGGGCGC ATCGTTCAGA AGCGCGTGCC TCATCCGGAG
CAGGATGAGG CTCTTCAGAT CGACAGCTTT GCATACGATC GGCACGGGGA CTTGGTGCTC
GCGGAGAATC CGTCTTGTCG CGTCGAGTTC GATTACGATG CAGCGGGCCG CATGATCGAG
GAGCGACAGG GTGACGACTT CACGATTGCC AGTGATTATG ACGAAGCCGT GACCTGCCCC
CTTCGATAG
|
|---|
| Protein sequence | MIDPAGRTTA WEYDAYGSLL VQTLPDGSAV RTEFDLDHRP VCMTLIGGRQ WGYEWNTFGN
LLAQSDPSGA ISRYTYDEYG QLVEHTGPRG ASTRFDYHPD GNLAAQIDAL GHRTQYRYDA
RGYLGEAIDA LGQQSQYEYD RNGHLTRAIE PGGREIHCAY DADGNLSRHR DPMGHVTQME
YSALGQVSRR LAPDGTTVEY RYDTEEQLIG VVNERSELYA LERDALGRIV VETDYWGQAR
RYRYGAAGEL LCSTDPLGQT VEYRYDWLGR IVQKRVPHPE QDEALQIDSF AYDRHGDLVL
AENPSCRVEF DYDAAGRMIE ERQGDDFTIA SDYDEAVTCP LR
|
|---|
| |