Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMAA0141 |
Symbol | |
ID | 3086872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006349 |
Strand | - |
Start bp | 140118 |
End bp | 141638 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637564074 |
Product | RND efflux system, outer membrane protein |
Protein accession | YP_104978 |
Protein GI | 53716769 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAACG ATGCGCGTCA CGACGAACGG CATCAGCGGC GGCGCGGCAT CGCGCGCCGC GCGGCGCGGC ACGCGGCCGC GCTCGCGCTG TGCGCGGCCG TGTCGGGCTG CCTGTCGCTC GCGCCCGACT ACGCGCGCAA GCCCCCGCCC GTGCCCGCCG CGTACCCGGC TTATCCGGGC GAACCGGGCG CCGGCTCGCG CACGCTCGAG CAGCTCGGCT GGCGCGCGTA TTTCGTCGAT CCGCGCTTGC AGGCGCTGAT CGAAACCGCG CTCGCGAACA ACCGCGATCT GCGGATCGCC GCGCAGCGCG TCGAGCAGGC GCGCGCGGCG TACGGCATCC GCCGCGCGGA CCAATACCCG ACGATCGCCG CGAACGCCGC ATATCTTCGC TTTCGCGAGC CGGGCGGCCT GCTGCTGCCG AGCCCGATCA TCGGCGAGCT GTATTCGGCG TCGCTGAGCG AAGTGCAATG GGAAATCGAT TTCTGGGGCC GCGTGCGCAG CCTGAAGGCG GCCGCGCTCG ACACGTTCCT CGCGAGCGAC GCGTCGCGCC GCGCGGTGAC GGTGAGCCTG ATCGGCCAGG TCGCCGACGC GTATCTCGCG CTGTGCGCGT ACGACGAGCG CCTCGCGCTC ACCAACGAGA CGATCGCGAG CCGCCGCGAC TCGCTGCGGA TCTTCCGCCG GCGCTACGAG GAAGGTGCGA TCTCGAAGCT CGATCTGACG CAATCGGAAA TCCTGCTGCA GCAGGCGCAA ACGCTCGGCT CGCAGCTCCA GCAGGCGCGC GACGTGCAGC AGCACGCGCT CGACCTGCTC GTCGGCACGA ACGCGGCCGC GCGCACGCCC GCGTCGCTCG ACGACGCGAG CATCGCGCCC GATCTCGCGC CCGGCCTGCC GTCCGAGCTG CTCGCGAACC GGCCCGACGT GGTCGCGGCC GAGTATCAGT TGCGCGCCGC GCACGCGAAC ATCGGCGCGG CGCGCGCCGC GTTCTTTCCG CGCATCGCGC TCACGAGCTC GATCGGCACC GGCAGCACCG AGCTGCACAA CCTGTTCGCC TCCGGCACGG CCGCGTGGAA CTTCATTCCG AACCTGTCGG TGCCGATCTT CGACGCGGGC CGCAACATCG GCAACCTGAA GCTCGCGAAC GCGCGCCGCG ACGAAGCGCT CGCCCAGTAT GAGAAGACGA TCCAGACGGC GTTTCGCGAC GTCGCCGACG CGCTCGCCGC GCGCCACTGG CTCGCCGATC AGGTGCGCAT CGCGCAGGAA ACGCTCGCGA CGCAAGCCGA GCGCGCGCGG CTCGCGAAGC TGCGCTACGA CAGCGGCGCC GCGCGCTTTC TCGAAGTGCT CGACGCGCAG CGCGACTTGC TGAACGCGCA GCAGCAGCTC GTGCAGACGC GCCGCGCGCT GCTCGCGAGC CGCGTCGCGC TGTACGCGGC GCTCGGCGGG CGTCTGGACG AGCCCGCGCG CGACGGCGCC GCGCCGCGCC CCTCTCCCGA ACCCTCAGCA AAACAAGGTC CGTTGTCATG A
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Protein sequence | MRNDARHDER HQRRRGIARR AARHAAALAL CAAVSGCLSL APDYARKPPP VPAAYPAYPG EPGAGSRTLE QLGWRAYFVD PRLQALIETA LANNRDLRIA AQRVEQARAA YGIRRADQYP TIAANAAYLR FREPGGLLLP SPIIGELYSA SLSEVQWEID FWGRVRSLKA AALDTFLASD ASRRAVTVSL IGQVADAYLA LCAYDERLAL TNETIASRRD SLRIFRRRYE EGAISKLDLT QSEILLQQAQ TLGSQLQQAR DVQQHALDLL VGTNAAARTP ASLDDASIAP DLAPGLPSEL LANRPDVVAA EYQLRAAHAN IGAARAAFFP RIALTSSIGT GSTELHNLFA SGTAAWNFIP NLSVPIFDAG RNIGNLKLAN ARRDEALAQY EKTIQTAFRD VADALAARHW LADQVRIAQE TLATQAERAR LAKLRYDSGA ARFLEVLDAQ RDLLNAQQQL VQTRRALLAS RVALYAALGG RLDEPARDGA APRPSPEPSA KQGPLS
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