Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA3395 |
Symbol | trmE |
ID | 3089630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei ATCC 23344 |
Kingdom | Bacteria |
Replicon accession | NC_006348 |
Strand | - |
Start bp | 3504758 |
End bp | 3506161 |
Gene Length | 1404 bp |
Protein Length | 467 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637563932 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_104852 |
Protein GI | 53724896 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.408647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGCCA CTGATTCCGA TCCGATCGTC GCCATTGCCA CCGCGTCAGG CCGAGGCGGG ATCGGCGTCG TGCGCCTTTC GCTCGGGCGA GCGGGGGAAG CGGCGGCGCG CGCGCTGAGC GATGCGCTGT GCGGTGCGCG ACTCATGCCG AGGCATGCGA GCTACGTGCC GTTTCTCGAC GGCGCGGGCG AGCCGCTCGA TCGCGGCATC GCGCTCTATT TCCCCGCGCC GCATTCGTAT ACGGGCGAGC ACGTGATCGA GCTGCAAGGC CACGGCGGGC CGATCGTGCT GCAGCTCTTG CTGCAGCGCT GCCTCGACGC CGGGCGTGCG CATGGGCTGC GGCTCGCTGA GCCGGGCGAA TTCACGCGCC GGGCGTTCCT GAACGACAAG CTCGACCTCG CGCAGGCGGA GGCCGTCGCC GATCTGATCG AGGCGAGCAC CGAGGCGGCT GCGCGTTCGG CGGGCCGCTC GCTCGACGGG GCGTTCTCGC GCGACATCCA TGCGCTCGTC GACGACGTGA TCGCGCTGCG GATGCTCGTC GAGGCGACGC TCGATTTTCC GGAGGAGGAG ATCGACTTCC TGGAGGCGGC CGACGCGCGC GGCAAGCTCG CGCACATCCG CGAGCGGCTC GCGCACGTGC TCGGCGACGC GCGGCAGGGG GCGTTGTTGC GCGAGGGGCT ATCGGTCGTG CTTGCCGGGC AGCCGAACGT CGGCAAGTCG TCGCTGTTGA ATGCGCTTGC GGGCGCGGAA CTGGCGATCG TCACGCCGAT CGCCGGCACG ACGCGCGACA AGGTTGCGCA GACGATTCAG ATCGAGGGCA TTCCGTTGCA CATTATCGAT ACGGCGGGCT TGCGCGAAAC GGAGGACGAG GTCGAGAAGA TCGGCATCGC GCGCACGTGG GGCGAGATCG AGCGGGCGGA CGTCGTGCTG CACCTGCTCG ATGCGAGAAG CGGGCTTGGC CCGGGCGACG AGGCGATCGC CGCGCGCTTC CCGGACGGCG TGCCGGTGGT GCGCGTGCTG AACAAGACGG ATCTGACGGG CGCGCCGGCA TCGGTGACGC GGACAGGCGG CGGCGCGGCG CGCGCGGACG TATGTGAAGT GCGGCTGTCG GCGAAGCGCG GCGACGGGAT CGATTTGCTG CGCGGCGAGC TGCTGCGGAT CGCCGGTTGG CAGGCGGGTG CGGAAAGCGT GTATCTCGCC CGCGAGCGGC ATCTGATCGC GCTGCGCGCG GCGCAGGCGC ATCTCGCGCG GGCGGCGGAG CACGCGGAGC AGAATGCGCA GGCGCTGGAT CTCTTCGCCG AGGAACTGCG GCTCGCGCAG GAGCGGCTTA ATTCGATCAC CGGGGAGTTT ACGTCCGATG ATTTGTTGGG GGTGATTTTT AGTCGGTTTT GTATCGGAAA ATAA
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Protein sequence | MLATDSDPIV AIATASGRGG IGVVRLSLGR AGEAAARALS DALCGARLMP RHASYVPFLD GAGEPLDRGI ALYFPAPHSY TGEHVIELQG HGGPIVLQLL LQRCLDAGRA HGLRLAEPGE FTRRAFLNDK LDLAQAEAVA DLIEASTEAA ARSAGRSLDG AFSRDIHALV DDVIALRMLV EATLDFPEEE IDFLEAADAR GKLAHIRERL AHVLGDARQG ALLREGLSVV LAGQPNVGKS SLLNALAGAE LAIVTPIAGT TRDKVAQTIQ IEGIPLHIID TAGLRETEDE VEKIGIARTW GEIERADVVL HLLDARSGLG PGDEAIAARF PDGVPVVRVL NKTDLTGAPA SVTRTGGGAA RADVCEVRLS AKRGDGIDLL RGELLRIAGW QAGAESVYLA RERHLIALRA AQAHLARAAE HAEQNAQALD LFAEELRLAQ ERLNSITGEF TSDDLLGVIF SRFCIGK
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