Gene BMA3304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA3304 
SymboldppD 
ID3089667 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp3415860 
End bp3416852 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content67% 
IMG OID637563855 
Productpeptide ABC transporter, ATP-binding protein 
Protein accessionYP_104775 
Protein GI53724544 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATT TATTGACCAT CCGCAATCTC GCGGTGAACT TCAGCGGGCT GCCCGCGGTC 
GACAGGATCA ACCTGTCCAT CGCGCGCGGC GAAGTGGTCG GCGTGGTGGG CGAGTCCGGC
TCGGGCAAGA GCGTGACGAT GATGGCGCTG ATGAGCCTGA TCGACGCGCC CGGCATCGTC
ACCGCCGACG AAGTCACGTT CGACGGCGTC GATCTGCTCA AGGCGAGCGC GAAGGCGCGC
CGCCGCATCA TCGGCAAGGA CGTCGCGATG GTGTTCCAGG ATGCGCTGAC GAGCCTGAAC
CCGAGCTACA CGGTCGGCTA TCAGATCAAG GAGGTGCTGA AGCTGCACGA GGGCCTGCGC
GGCGACGCGC TGAACAAGCG CGCGCTCGAA CTGCTCGATC AGGTCGGGAT TCCCGATGCG
AGGAACCGCA TCGGCACGTT TCCGCACCAG ATGTCGGGCG GCATGAACCA GCGCGTGATG
ATCGCGATGG CGGTGGCGTG CAACCCGAAG CTCCTGATCG CCGACGAGCC GACGACCGCG
CTCGACGTGA CGATCCAGGC GCAGATCATG GATCTGCTCG TCACGCTGCA GAAGGAGCGC
GGAATGGCGC TCGTGCTGAT CTCGCACGAT CTCGCGGTGG TCTCGGAAGT CGCGCAGCGC
GTCGCGGTGA TGTACGCGGG CGAGATCATC GAGACGAACC GCGTGCCGGA CATCTTCGCG
CATCCGCATC ATCCGTACAC CGAAGCGTTG CTCGCGGCGA TTCCGGAGCA CAATGCGGGC
GCGAAGCGGC TCGCCGCGCT GCCGGGGATG GTGCCGGGCC GCGACGACCG GCCGAGCGGG
TGCCTGTTCG CGCCGCGCTG CAAGTACGTC GTCGACGACT GCATGAAGGC GCGGCCTACG
CTCGCCGAGC TCGCGCCGGG CACCGGCATG CGCGCGCGCT GCATCAAGCC CCTCAACCTG
GAAGCGCCGC ACACGCAAGG AGGCGCGCGA TGA
 
Protein sequence
MSDLLTIRNL AVNFSGLPAV DRINLSIARG EVVGVVGESG SGKSVTMMAL MSLIDAPGIV 
TADEVTFDGV DLLKASAKAR RRIIGKDVAM VFQDALTSLN PSYTVGYQIK EVLKLHEGLR
GDALNKRALE LLDQVGIPDA RNRIGTFPHQ MSGGMNQRVM IAMAVACNPK LLIADEPTTA
LDVTIQAQIM DLLVTLQKER GMALVLISHD LAVVSEVAQR VAVMYAGEII ETNRVPDIFA
HPHHPYTEAL LAAIPEHNAG AKRLAALPGM VPGRDDRPSG CLFAPRCKYV VDDCMKARPT
LAELAPGTGM RARCIKPLNL EAPHTQGGAR