| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA3269 |
|---|
| Symbol | |
|---|
| ID | 3090065 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | - |
|---|
| Start bp | 3377971 |
|---|
| End bp | 3379416 |
|---|
| Gene Length | 1446 bp |
|---|
| Protein Length | 481 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 637563822 |
|---|
| Product | major facilitator family transporter |
|---|
| Protein accession | YP_104742 |
|---|
| Protein GI | 53724467 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCGTCGCT CCATCATACC CCGACGCGCG CGGCCGCCAT CCGATGATTC ATTCGGCATT
CGGAAATGCG GCCAAAAGCC AACGCGTCGT CTGACGAAAC GACGCCGAAC GGGCAACCGG
CGTATCGTTG AGGCTTGCCT CGCATGGAGA ATCAGCGTGA CTGTACCACC CGGCGCGCCG
CGGCCCGCCG CCGCCGGCCG AGCGAACTCG GCGCATGCCG CGCAAGGCGC GTCGCCCGTC
GGCGCCGCCC CGTATCTCGA GCGCGGCTCA CGCGGTTACT GGCACGCGAG CGTCGCGCTG
CTGTTCGCCG GTTACGCGAC GTTCTCGCTG CTCTATTACG TGCAGCCGCT GTTGCCGGAA
TTCTCGAAGG CATTCGGCGT GAGCCCCGCG CAGAGCAGTC TCGCGCTGTC GTTCGCGACG
GCCGCGCTCG CCGCCGCCGT GTTCGTCGCC GGCTTCGTCT CCGAAGCGTT GAGCCGCCAC
CGGCTGATGA CGGCTTCGCT CACCGCTTCG TCGCTGCTCA CGCTCGCCGC CGCATTCGCG
CCGCACTGGC ATCAACTGCT GATCCTGCGC GCGCTCACGG GGCTCGCGCT CGGCGGCGTG
CCCGCCGTCG CGATGGCGTA TCTCGCCGAA GAAGTGCACC CGGACGGGCT CGGACTCGCG
ATGGGGCTCT ATGTCGGCGG CACCGCGATC GGCGGGATGG CGGGGCGCGT GATCACCGGC
ATTCTCACCG ACCTGTTCTC GTGGCGCATC GCGGTGGGCG CGATCGGCGT GCTCGGCCTC
GCGTCGATGC TCGCGTTCCG CATGCTGCTG CCGCCGTCGC GCCATTTCGT GCCGCGCCGC
GGCCTGAACC TCGCGCATCA CCGCACGTCG CTCGCCCATC ATCTCCGCGG CCAGCGCGAG
CTGCCCGTGC TGTTCGCGAT GGCGTTCGTG CTGATGGGCA GCTTCGTCAC GCTCTACAAC
TACATCGGCT ATCGGCTGCT CGCGCCGCCG TATTCGATGG GGCAGGCGAC GATCGGCGCG
ATCTTCGTCG TCTATCTGGT GGGCGTCGTC GCATCCCCGC TGTCGGGACG GCTCGCCGAT
ACGCTCGGCC GCGGCCGCGT GCTGATCGCG AGCCTCGCGG TGATGCTCGG GGGCGTCGCG
CTGACGCTGC TGCATCCGGT TGCCGCGATC GTCGCGGGCG TCGCATGCGT GACGTTCGGC
TTCTTCGCGG GCCACGCGGT CGCGAGCGGC TGGGTCGGCC GGCTCGCGCA GCACGGCAAA
GGCCAGGCGG CCGCGCTCTA TCTACTCGCT TACTATCTTG GCTCGAGCGT CGTCGGCTCG
CTCGGCGGAC GCTTCTGGAG CACGCTCGGC TGGCCGGGCG TCGCGGCGCT CGTCGGCGCG
CTGCTCGCGC TCGGCGTGGT CGCGGCCGCC TGGCTGCGCG CGCGCGAGCG CGGCGGCGCC
GCGTGA
|
|---|
| Protein sequence | MRRSIIPRRA RPPSDDSFGI RKCGQKPTRR LTKRRRTGNR RIVEACLAWR ISVTVPPGAP
RPAAAGRANS AHAAQGASPV GAAPYLERGS RGYWHASVAL LFAGYATFSL LYYVQPLLPE
FSKAFGVSPA QSSLALSFAT AALAAAVFVA GFVSEALSRH RLMTASLTAS SLLTLAAAFA
PHWHQLLILR ALTGLALGGV PAVAMAYLAE EVHPDGLGLA MGLYVGGTAI GGMAGRVITG
ILTDLFSWRI AVGAIGVLGL ASMLAFRMLL PPSRHFVPRR GLNLAHHRTS LAHHLRGQRE
LPVLFAMAFV LMGSFVTLYN YIGYRLLAPP YSMGQATIGA IFVVYLVGVV ASPLSGRLAD
TLGRGRVLIA SLAVMLGGVA LTLLHPVAAI VAGVACVTFG FFAGHAVASG WVGRLAQHGK
GQAAALYLLA YYLGSSVVGS LGGRFWSTLG WPGVAALVGA LLALGVVAAA WLRARERGGA
A
|
|---|
| |