Gene BMA3254 details

Gene Information

• Locus tag: BMA3254
• Symbol: hslV
• ID: 3089565
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: -
• Start bp: 3363532
• End bp: 3364068
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637563808
• Product: ATP-dependent protease peptidase subunit
• Protein accession: YP_104728
• Protein GI: 53724453
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG5405] ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 0.13325
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGCAAT TTCACGGCAC GACGATTCTC TCCGTGCGGC GCGGCGACAA GGTCGCGCTC 
GGCGGCGACG GCCAGGTCAC GCTCGGCAAT ATCGTGATGA AGGGCGGTGC GCGCAAGGTG 
CGCCGCATCT ACAACAACCA GGTGCTCGTC GGCTTCGCGG GCGGCACGGC CGACGCCTTC 
TCGCTGCTCG ACCGCTTCGA GGCGAAGCTC GAAAAGCATC AGGGCAACCT CACGCGCGCG 
GCCGTCGAAC TCGCGAAGGA CTGGCGCACC GACCGCCTGC TGCGCCGTCT CGAGGCGATG 
CTGATCGCGG CCGACGCGAC GACGACGCTC GTCATCACCG GCAACGGCGA CGTGCTCGAC 
CCGGAAGGCG GAATCTGCGC GATCGGCTCG GGCGGCTCGT ACGCGCAGGC CGCCGCGCGC 
GCGCTCGCCG AGAATACCGA TCTGTCCCCG CGCGAGATCG TCGAGAAGGC GCTCGGGATC 
GCGGGCGACA TGTGCATCTA CACGAATCAC AACCGGATCA TCGAGACCAT CGAGTAA 

 

Protein sequence

MEQFHGTTIL SVRRGDKVAL GGDGQVTLGN IVMKGGARKV RRIYNNQVLV GFAGGTADAF 
SLLDRFEAKL EKHQGNLTRA AVELAKDWRT DRLLRRLEAM LIAADATTTL VITGNGDVLD 
PEGGICAIGS GGSYAQAAAR ALAENTDLSP REIVEKALGI AGDMCIYTNH NRIIETIE