Gene BMA3117 details

Gene Information

• Locus tag: BMA3117
• Symbol: lolB
• ID: 3090100
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: +
• Start bp: 3212982
• End bp: 3213629
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 72%
• IMG OID: 637563681
• Product: outer membrane lipoprotein LolB
• Protein accession: YP_104602
• Protein GI: 53724082
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis
• TIGRFAM ID: [TIGR00548] outer membrane lipoprotein LolB

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.632142
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACGACGA TGCCGCGTTT TGCCCAACCG CGCGCGCGCG GCGTCGCCCT CGTCGTGGCG 
GCCGCGGCCG CCGTCCTGCT CGGCGCCTGC GCGACGCAGC CGCCGCGCGC GCCCACCGCC 
GCGCCCACCG CCGCGCCCGA CGCCGCGCCC GACGCGCGGC AGACCGAGCA GAATCGCGCG 
TACACGGGCC GCTTCGCGGT TCAGTACCAA GACCCGCTCG GCAATCCGCG CAACGTCTAC 
GGCAATTTCG ACTGGCAGGA GCAGGGCACG AACGTGTCGC TCGAACTGCG CAGCCCGCTC 
GGCCAGACGC TTGCGATCGT GAAATCCGCG CCGGGCGGCG CGTCGCTCGA ACTGCCGAAC 
CGTCAGCCGC AATTCGCGCC GGACGTCGGC GAACTGATGC AGCGCGCGCT CGGCTTCGCG 
CTGCCGCTCG ACGGCCTGCG CTACTGGCTG TTGCCGACGC CGTCGCCGAC GACGCCGGCG 
ACGACGGTGC GCGATCCGCA GGACGGCGCG CGAATCAAGG AAATCCGTCA GGACGGCTGG 
ACCATCGATT ACGTCGCATA CGCCGACGCG CCCGCCGCCG GCGTGAAGCG CATCAATCTG 
GCGCGGCAGA AGCCGCCCCT CGACATCAAG CTCGTGCTCG ACCGCTGA 

 

Protein sequence

MTTMPRFAQP RARGVALVVA AAAAVLLGAC ATQPPRAPTA APTAAPDAAP DARQTEQNRA 
YTGRFAVQYQ DPLGNPRNVY GNFDWQEQGT NVSLELRSPL GQTLAIVKSA PGGASLELPN 
RQPQFAPDVG ELMQRALGFA LPLDGLRYWL LPTPSPTTPA TTVRDPQDGA RIKEIRQDGW 
TIDYVAYADA PAAGVKRINL ARQKPPLDIK LVLDR