| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA2876 |
|---|
| Symbol | |
|---|
| ID | 3088028 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | + |
|---|
| Start bp | 2967950 |
|---|
| End bp | 2970415 |
|---|
| Gene Length | 2466 bp |
|---|
| Protein Length | 821 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637563464 |
|---|
| Product | TPR domain-containing protein |
|---|
| Protein accession | YP_104386 |
|---|
| Protein GI | 53724345 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGTCCGGCC GCCGCCGGCG GCCGGGCGCC GACGATTCGC CAAATTGGCG GCTCTTTCCT
GTTCAGTTCG CCGCATTGGC CCGCTCGGCC CGGCCGGATA ATTTTCACCA TTGCACACTC
CGTCCGGCTA ACCCCATGTC CGAATCGACG ACGTCCGACA CCCTGACGCC CGAGCAACAG
TTCGAGGAGG ACATCGCGCT CGTCCTCAAG AACGCGATCG AGCTGCATCA CCAAGGTGAT
TTCGAGAACG CGCGCGCGCT CTACGAAGCG ATCGTCGACG CGAAGCCGGA CCACGCCGAC
GCCCAATACG ACCTCGGCGT GTTAAAGGTC CAGATCGGCC GGGCCGCCGA CGCGCTGCCG
CACTTCGAGA TCGCGCTCGG CGGCGCGCCG AACAACGGCC AGTACTGGGT CAGCTATGTG
AACGCGCTGA TCGATGCCGG CCAGATCGCG GCGGCATGGA CCGCGCTCGG GCTCTGCCAG
CAGCGCGGCG TGCGCGGCCC GGCCGTCGAC GGGCTGATCC TGCGGCTCGC GCATTCGGAG
GAAGGCAAAC CGGCCTATAT CGGCACGGCG GCCGCGGCAC CGGAAGCCGC GGCGCCGGCC
GATGCCGCGG CGAACGCCGC GGAGCCCGTG CGCGCCGACG CGCGCAAGCC GTCCGAGCAG
GATGTCCGGC GCTTCGCGAC GCTCTACAAC AAGCGGCGCA TGGCGGAGGC GATCAAGTTC
GCGCGCGCGC TCGCCCAGCG CTATCCGGGC AGCGGCGTCG CCTGGAAATC GCTCGGCTTC
GCGCTCCATC GCGACGGCCA GTACGGGCCG GCCTGCGAAG CGCTGACCAA GGGCGCGGCG
ATGCTGCCCG ACGATGCCGA ATGCAACACG CTCTATGCGG ACACGCTGCG CGTGCTGAAC
CGGCTCGCCG ACGCCGAAGC TCAGGTGCGG CGTGTGCTCG ACGGCACGCC CGATTATGCT
GAAGCGCATC GCGTGCTGAA CATGACGCTG AGCGCGCGCG GCCGCTACCA GGAAGCGATC
GAGGCCGGCC GGCGCTCGGT CGAGCTCGCG CCGAACTCGG TGAACGCGCA CGGCTCGCTC
GCGGTGACCC TCAGCGACTA CGGGCAGACC GACGAAGCCG AAATCCATTT CCGCCGCGCG
CACGAACTCG ATCCGAAGGA TCCGATGGCG TACAGCAACC TGCTGTTCTG CCAGTCGCAC
AAAATCGACG TGTCGATCCG CGAGCTGTTC GACGCGCATC GCGCGTTCGG CGAGCTGTAC
GAAGCGCCGC TGCGCGGCGC GACGCCGAAA CATGCGAACT CCCGCGATCC GGAACGCCGC
CTGCGCATCG GATTCGTGTC GGGCGACCTG TTCCTGCACG CGGTGTCCTC CTATCTGCTG
CCGCTCGTCG ACGCGCTCGC GAAGGACCCG AGCGTGTCGC TGCACTTCTA TTACACGTTC
GCCCGCGAAG ATTCGGTGAC CGAGCGGATT CGCTCGTACG CGCAAGGCTG GCACATGGTG
ATGCCGCTCA GCGACGAGCA ATTCGCCGAA CGCGTGCGCC ACGACAGGAT CGACATCCTC
GTCGACCTGT CAGGCCACAG CGGGCGCAAC CGGCTGCCGA TGTTCGCGCG CAAGCCCGCG
CCGATCCAGG TGAGCTGGAT CGGCTACCCC GGCACGACCG GGCTCGAGGC GATCGACTAT
TACCTCGCCG ATCCGTATGC GGTGCCGTTC GGCCCGATGC AGGCGCAGTT CACCGAGAAG
ATCGTCCACC TGTCGTCGGG CGCGACGTTC TCGCCGGACG GCAACGCGCC GCCCGTCAAC
ATGCTGCCCG CGCTACACAA CGGCCACGTG AGCTTCGGCA GCTTCAACCG GCTCAACAAG
CTGCGGGGCG ACGTGATCGC CGTGTGGGCG CGCATCATGC GCGCGGTGCC CGGTTCGCGC
ATCGTGCTCG GCTCGATTCC GAAGGACGGC GGCGGGGCCG CGATGATCGA GTGGTTCGAG
CAAGAAGGGA TCGCGCGCGA GCGGCTGTCG TTCCAGCCAC GCTCGGTCAC GGCCGTCTAT
CTGCAGCAGC ACCATCACGT CGACGTGTGC CTCGACACGT TCCCGTACAC CGGCTCGACC
ACCGCGCTCA ACGCGCTGTG GATGGGCGTG CCGACGCTGA CGATGCGCGG CGAGACCTTG
CCGAGCCGCG CCGGCCTCAC ATGGATGTCG CACGTCGGGC TCGAATCGTT CATCGCAGAC
GACATCGACG ACTTCGTCGC CAAGGGCATC GCGCTCGCGT CCGACATCCC GGCGCTCGCG
CGCATCCGCG GCGAGTTGCG CGAGCGCTGC ATGCGCTCGC CAGCGTTCCA GCCGCAGCGC
GTCGCGCAGG ATGTGTCCGA CGCCTTTCGC ATCATGTGGC GCCGCTGGTG CGACGGCCAG
CCGCCCGCCC CGTTCGCGGT GCCGCCGCGC GACGCAACGA CAACCGTCGC AGGAGACCGC
TCATGA
|
|---|
| Protein sequence | MSGRRRRPGA DDSPNWRLFP VQFAALARSA RPDNFHHCTL RPANPMSEST TSDTLTPEQQ
FEEDIALVLK NAIELHHQGD FENARALYEA IVDAKPDHAD AQYDLGVLKV QIGRAADALP
HFEIALGGAP NNGQYWVSYV NALIDAGQIA AAWTALGLCQ QRGVRGPAVD GLILRLAHSE
EGKPAYIGTA AAAPEAAAPA DAAANAAEPV RADARKPSEQ DVRRFATLYN KRRMAEAIKF
ARALAQRYPG SGVAWKSLGF ALHRDGQYGP ACEALTKGAA MLPDDAECNT LYADTLRVLN
RLADAEAQVR RVLDGTPDYA EAHRVLNMTL SARGRYQEAI EAGRRSVELA PNSVNAHGSL
AVTLSDYGQT DEAEIHFRRA HELDPKDPMA YSNLLFCQSH KIDVSIRELF DAHRAFGELY
EAPLRGATPK HANSRDPERR LRIGFVSGDL FLHAVSSYLL PLVDALAKDP SVSLHFYYTF
AREDSVTERI RSYAQGWHMV MPLSDEQFAE RVRHDRIDIL VDLSGHSGRN RLPMFARKPA
PIQVSWIGYP GTTGLEAIDY YLADPYAVPF GPMQAQFTEK IVHLSSGATF SPDGNAPPVN
MLPALHNGHV SFGSFNRLNK LRGDVIAVWA RIMRAVPGSR IVLGSIPKDG GGAAMIEWFE
QEGIARERLS FQPRSVTAVY LQQHHHVDVC LDTFPYTGST TALNALWMGV PTLTMRGETL
PSRAGLTWMS HVGLESFIAD DIDDFVAKGI ALASDIPALA RIRGELRERC MRSPAFQPQR
VAQDVSDAFR IMWRRWCDGQ PPAPFAVPPR DATTTVAGDR S
|
|---|
| |