Gene BMA2780 details

Gene Information

• Locus tag: BMA2780
• Symbol: gspH
• ID: 3091316
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: -
• Start bp: 2870608
• End bp: 2871198
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 73%
• IMG OID: 637563375
• Product: general secretion pathway protein H
• Protein accession: YP_104298
• Protein GI: 53723927
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2165] Type II secretory pathway, pseudopilin PulG
• TIGRFAM ID: [TIGR01708] general secretion pathway protein H; [TIGR02532] prepilin-type N-terminal cleavage/methylation domain

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGCAC GACCCGGCAC GATTTTCGTT TGCGATACGC GGCGTCACGC GGGGGCCGCC 
CTCGGCGGGG CCGCGAAAGC GCGCGCCGGC GCGTGCGCGG GTGTCTCGTC CGGGCGCCCG 
GCGGGCACCG CCTCGGCGCG CCGCGCGCGC GGCTTCACGC TGCTCGAAAT GCTCGTCGTG 
CTCGTGATCG CGGGCATCCT GGTGTCGGTC GCGTCGCTCA CGCTCAGGCG CAACCCGCGC 
ACCGACCTGC GCGAGGAAGC GCAGCGCATC GCGCTGCTGT TCGAGACGGC GGGCGACGAA 
GCGCAGGTGC GTGCGCGGCC GATCGCGTGG CGCGCCACCG AGCATGGTTT CCGTTTCGAC 
ATCCGCACGG GCGACGGCTG GCGCCCACTG CGCGACGACG TGCTGCGCGC GCGCGACTGG 
GATGGCGGCG TGACGGGCGC GGCGATCGAC TATCCCGGCT CGGACACGCA CACGGACGCG 
GTCGTATTCG GCACCGAAAG CATCGACGTG CCGGTGCGCG TCACGCTGTA TTCGGCGGTC 
GGCAGCGCGA CGATCGTCGG CACCGGCAAC GGCCGCTACG AGGTGCGGTG A 

 

Protein sequence

MYARPGTIFV CDTRRHAGAA LGGAAKARAG ACAGVSSGRP AGTASARRAR GFTLLEMLVV 
LVIAGILVSV ASLTLRRNPR TDLREEAQRI ALLFETAGDE AQVRARPIAW RATEHGFRFD 
IRTGDGWRPL RDDVLRARDW DGGVTGAAID YPGSDTHTDA VVFGTESIDV PVRVTLYSAV 
GSATIVGTGN GRYEVR