Gene BMA2607 details

Gene Information

• Locus tag: BMA2607
• Symbol: rpsD
• ID: 3089548
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: -
• Start bp: 2717211
• End bp: 2717834
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 637563213
• Product: 30S ribosomal protein S4
• Protein accession: YP_104141
• Protein GI: 53723829
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01017] ribosomal protein S4, bacterial/organelle type

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCACGTT ATATCGGCCC CAAAGCCAAG CTGTCCCGCC GTGAAGGCAC CGATCTGTTC 
CTGAAGAGCG CACGCCGCTC GCTCGCCGAC AAGTGCAAGC TCGACAGCAA GCCGGGTCAG 
CACGGCCGCA TCTCCGGTGC GCGCACGTCG GACTACGGCA CGCAGCTGCG CGAGAAACAG 
AAGGTCAAGC GCATTTACGG TGTGCTGGAG CGCCAGTTCC GCCGCTACTT CGCTGAAGCC 
GACCGCCGCA AGGGCAACAC GGGTGAAACC CTGCTGCAAT TGCTCGAGTC GCGTCTCGAC 
AACGTCGTGT ACCGCATGGG CTTCGGCTCG ACCCGCGCTG AAGCGCGTCA GCTCGTGAGC 
CACAAGGCGA TCACCGTCAA CGGCATCGTC GCGAACATTC CGTCGCAGCA AGTGAAGGCC 
GGCGACGTGG TTGCGATCCG TGAAAAGGCG AAGAAGCAAG CGCGTATCGT CGAAGCGCTG 
TCGCTGGCCG AGCAAGGCGG CATGCCGAGC TGGGTTGCGG TCGATGCGAA GAAGTTCGAA 
GGCACCTTCA AGCAAGTGCC GGAGCGCGCC GACATCGCGG GCGACATCAA CGAAAGCCTG 
ATCGTCGAAT TGTATTCGCG TTAA 

 

Protein sequence

MARYIGPKAK LSRREGTDLF LKSARRSLAD KCKLDSKPGQ HGRISGARTS DYGTQLREKQ 
KVKRIYGVLE RQFRRYFAEA DRRKGNTGET LLQLLESRLD NVVYRMGFGS TRAEARQLVS 
HKAITVNGIV ANIPSQQVKA GDVVAIREKA KKQARIVEAL SLAEQGGMPS WVAVDAKKFE 
GTFKQVPERA DIAGDINESL IVELYSR