| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA2108 |
|---|
| Symbol | rfaC |
|---|
| ID | 3088782 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei ATCC 23344 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006348 |
|---|
| Strand | - |
|---|
| Start bp | 2197000 |
|---|
| End bp | 2198022 |
|---|
| Gene Length | 1023 bp |
|---|
| Protein Length | 340 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637562744 |
|---|
| Product | lipopolysaccharide heptosyltransferase I |
|---|
| Protein accession | YP_103680 |
|---|
| Protein GI | 53725998 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0859] ADP-heptose:LPS heptosyltransferase |
|---|
| TIGRFAM ID | [TIGR02193] lipopolysaccharide heptosyltransferase I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.470648 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA TTCTCATTGT GAAGGTCACG TCGCTGGGCG ATGTCGTGCA GACGCTGCCC
GTCGTCGCGG ACCTCCACCG CGCGTTCCCC GGTGTGCAGG TGGATTGGGC CGTCGACGAG
TCGTGCGCCG AAGTGGTGCG CTGGAACACC GCCGTGAGCC GCGTGCTGTG CGCGCCGCTG
CGCCGTTTCA AGAAGGCGCG CAGCCCGGCC GACCTGAAGG CGATCGCGGC GTCGATCAGC
GAGCTGCGCG CGCATCGCTA CGATGCGGTG ATCGATCTTC ACGGGGTCTA CAAGAGTGCG
ATCATTTCAT TTCTTGCGCG TGCGCGCTGG CGTTACGGCT ACCGCAATCA GGATCTCGGC
GAGCTCGGCG CGATGTTCGC GTATAACGGC CGCTTCGGTC CGCGCCCCGC TTGCGACGCG
TGGCACGGCA TGCGCGTGAG CGCGGGACAG GCGCTCGGCT ACGAGCCTCA GGGCCGCGCC
GATTACCTGC TCGACGTGCC GCCGGAGTCG CGCGAGCCGC ATACGGCGCC GCTCGTCGCG
CTCGCGGAGC CGGGCGTGCC GTACGCGCTG TTCTTCCATG CGACCTCGAA CGACGACAAG
CGCTGGCCGA CCGATCGCTG GAGCGCGGTC GCGCGCGAGA TGCGCGCGCG CGGGCTGCGC
GTGCTGCTGC CGTGGGGCAG CGAGCGTGAA CGGGAAGAGG CGCAGCGGAT CGCCGCGCGC
GCGCCGGGCG CCGTCGTGCT GCCGAGGCTG ACGCTCGCCG ATGTCGCGCG CAAGATCGAT
CGCGCCGCGC TCGTGATCGG TGTCGATACC GGGTTCGTGC ACATGGCGCA CGCGCTCGAG
AAGCCGACCG TCATGATCTT TTGCGCGACG TCGCGCCAGC ATCTGGGCGT GAGCGGGGCG
CCGCACTCGC TGTCGATCGG CGACGAAGGC GCGACGCCGG GCGTCGACGA CGTGCTCGGC
GCGATCGAGC GCGTTTATCC GACGGGCGCC GTCGAGCAGC CGCGGCGTGT CGCCGCGATG
TGA
|
|---|
| Protein sequence | MKRILIVKVT SLGDVVQTLP VVADLHRAFP GVQVDWAVDE SCAEVVRWNT AVSRVLCAPL
RRFKKARSPA DLKAIAASIS ELRAHRYDAV IDLHGVYKSA IISFLARARW RYGYRNQDLG
ELGAMFAYNG RFGPRPACDA WHGMRVSAGQ ALGYEPQGRA DYLLDVPPES REPHTAPLVA
LAEPGVPYAL FFHATSNDDK RWPTDRWSAV AREMRARGLR VLLPWGSERE REEAQRIAAR
APGAVVLPRL TLADVARKID RAALVIGVDT GFVHMAHALE KPTVMIFCAT SRQHLGVSGA
PHSLSIGDEG ATPGVDDVLG AIERVYPTGA VEQPRRVAAM
|
|---|
| |