Gene BMA2000 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA2000 
Symbol 
ID3088746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp2097376 
End bp2098224 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content69% 
IMG OID637562647 
Productphosphomethylpyrimidine kinase ThiD, putative 
Protein accessionYP_103587 
Protein GI53725991 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0351] Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase 
TIGRFAM ID[TIGR00097] phosphomethylpyrimidine kinase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAGCA ACACCCCTCC GATCGTCCTC ACTTTCGGCC TGTCCGATCC GACGGGCGGC 
TCCGGCCTGC AGGCCGACCT GATGACTCTG GCGAGCATGG GCTGCCATGG CGTATCCGTA
CTGACGGGCT ACACGGTGCG CGACTCCGCC GCCTGCGACG AAGTCACCGG TCTCGATCCC
GACACCGTCG CCGCGCAGGC GCGCATGCTG CTCGAAGACA TGCCCGTCGC GGCGTTCAAG
ATCGGCGCGG CGACGCGGGC GGAAGTCGTG AGTGCGATCG CCGAAGTGGT CGCCGACTAC
GACGGCGTGC CGCTCGTCCT CGCGCCGGAT TTCACGCTCG ACGACGAGCA CGTGCTCGCC
GCCGACGATC TGCGCGAGTC GATCGCCGAT CTGCTCGCGC CGCAGACGAC GCTTCTCGTC
GCCGACCACG CGACGCTCAT CGCGCTCGCA CAGCCCGACG GCGACGCCGA GGCGCCGAAC
CTCGACGCCG CGCTCTCGCA TCTGCTCGGC CAGGGCTGCG AGTACATTCT GGCGACCGAG
ACCGGCTCGC ACCGCCTCGT CAATACGCTG TACGGCGAGG AAGGCCAGAT CCGGCAGGAC
TTGTGGGAGC GCACGCCGCA CCGGTTGATG GGCATCACCG ACACGCTCGG CGCGGCGATC
GCCGCACTGC TCGCGAACGG CCAGGAGCCG CCGGAGGCGG TGCGCGAGGC GCAGGAGTAT
CTATACCAGG CGGCGCGCGA CGCATTTCGC CCCGGGATGG GCGCCTACTT GCCGGATCGC
TTCTTCTGGG CCCGCAGCAA CGAAGACGAA TCGCCGGCGC CGGCCGGAAT CGCCAAGCGG
ACGAACTGA
 
Protein sequence
MSSNTPPIVL TFGLSDPTGG SGLQADLMTL ASMGCHGVSV LTGYTVRDSA ACDEVTGLDP 
DTVAAQARML LEDMPVAAFK IGAATRAEVV SAIAEVVADY DGVPLVLAPD FTLDDEHVLA
ADDLRESIAD LLAPQTTLLV ADHATLIALA QPDGDAEAPN LDAALSHLLG QGCEYILATE
TGSHRLVNTL YGEEGQIRQD LWERTPHRLM GITDTLGAAI AALLANGQEP PEAVREAQEY
LYQAARDAFR PGMGAYLPDR FFWARSNEDE SPAPAGIAKR TN