Gene BMA1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1944 
Symbol 
ID3091318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand- 
Start bp2042709 
End bp2043872 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content68% 
IMG OID637562597 
Producthypothetical protein 
Protein accessionYP_103537 
Protein GI53725890 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0421] Spermidine synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.227944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGCGGCG CGGTTCAGGC TCGGGCGTTT CCCGTTCGTT TTCGCGCCGG TCCACGCGAA 
TTCGCGCCCG TTCGCGCCCG TTCGCGTCGC CGCGCATCGT TTCGTCCTGC TTCGCATCGC 
GCCACGCAAC GCGGCCCGAT GAAGCGGGCC AGCCGGCGGA TTCGCCGGCG CGCGGCCCCG 
CGGGTGCTAT CCTCTCGTTC GCTCAAACAG CCCCATTCAG CAAGAGACTC ATCCATGACC 
CGACTCATCA AGCGCGCGTC CGCCGAAGCG CGTGCGTTCC GGCGCGCGAA GCCGTCTCCG 
TTCAACGGCT CGGAGAAGCT CAAGCCGCCG CGCGCGAAGC GCGCCCGCGC CCAGTTCGAC 
GACGACTTCG ACCTGGGCGG CGTCGCCGTC CTCGACGAGC CGCGCAAGCC GCGCTTCGCG 
CCCGTCACGT TCTCCGAAGA GCGCGGTGTG CGCTATCTGC ATTTCGGCAC CGAGTGGGTG 
CAGGGCGCGA TGCGCCTGTC GAAGCCGTAT CACATCGAGC TCGAGTACGC GCAGCAGATG 
ATGGCATGGC TGCTCTTTCT CGAAACGCCG AAGCGCGTCG TCCAGCTCGG GCTCGGCACG 
GGCGCGCTGA CGAAATTCGC GCACCGCTTC CTGCCGCGCG CGCATGTCGA GGCGGTGGAG 
CTGAATCCGG CCGTGATCGT CGCCGCGCGC TCGATGTTCG AGCTGCCGCC CGACGACGCG 
CGCCTGAGCA TCCACGAAGC GGACGCGTGG GATTTCGTCA ATGATCCGAA GAATCGCGGC 
GCGATCGGCG CGCTGCAGAT CGACCTGTAC GACGCGACCG CGCGCGGCCC GGTGCTCGAC 
AGCGTCGCGT TCTATCGCGC GGTGCGCGCT TGCCTCGCCG ACGCGGGCAT CGCGACGATC 
AACCTGTTCG GCGACCATCC GAGCTTCGTG CGCAACATGA AGCATCTGAA CGCGGCGTTC 
GACCAGCGCG TGATCGCGCT GCCCGAGGTA CACGACGGCA ACCGGATCGC ACTCGCGTTC 
TCCGGTCCGC CGCTGTCGAT CTCGTTCGCC CAGTTGACCG AACGCGCGAA GCTGATCGAA 
GCTAAGCTGA GTCTGCCCGC GCGTTCGTGG GTGAAAGGTT TGAAAGCGTC GTTCGGCGAG 
CGCGCCGGCG TCTTCACGAT CTGA
 
Protein sequence
MRGAVQARAF PVRFRAGPRE FAPVRARSRR RASFRPASHR ATQRGPMKRA SRRIRRRAAP 
RVLSSRSLKQ PHSARDSSMT RLIKRASAEA RAFRRAKPSP FNGSEKLKPP RAKRARAQFD 
DDFDLGGVAV LDEPRKPRFA PVTFSEERGV RYLHFGTEWV QGAMRLSKPY HIELEYAQQM 
MAWLLFLETP KRVVQLGLGT GALTKFAHRF LPRAHVEAVE LNPAVIVAAR SMFELPPDDA 
RLSIHEADAW DFVNDPKNRG AIGALQIDLY DATARGPVLD SVAFYRAVRA CLADAGIATI 
NLFGDHPSFV RNMKHLNAAF DQRVIALPEV HDGNRIALAF SGPPLSISFA QLTERAKLIE 
AKLSLPARSW VKGLKASFGE RAGVFTI