Gene BMA1899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1899 
Symbol 
ID3090580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand+ 
Start bp1988888 
End bp1989820 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID637562554 
ProductECF subfamily RNA polymerase sigma factor 
Protein accessionYP_103494 
Protein GI53725463 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTTTTTC AAGCCGCCTT TCAAGCCCAT CCCAAGAACA TGACCGAAAC CTCCCGTCCG 
GCGCCGTCCG ACGAACCGTT CGCCGCGCTG CGCCCGCGCC TTTTCTCGAT CGCATACCGG 
ATGCTCGGCA CGCGCGCCGA TGCCGAAGAC GTGCTGCAGG ACGCCTGGCT GCGCTGGCAC 
CAGGCCGAAC GCGACACGCT CGATTCGCCC GAGGCATGGC TCGTCACGGT CGTCACCCGG 
CTGTCGATCG ATCGGCTACG CGCCGCGAAG GCGCAGCGCG ACGCCTATGT CGGATGGTGG 
CTCCCCGAGC CGCTCGTCGA CATCGACGAG CGCACGCCCG AGGCCGCGGC CGAGTTCGCC 
GACGACCTGT CGGTGGCGCT ACTGTGGGTG CTCGAACGGC TCTCGCCCGA GGAACGCGCG 
GCATTCCTGC TGCGCCAGGC GTTCGAGCGC GACTACGCGG AAATCGCGCA ACTGCTCGAC 
AAGAGCGAAG CGGCCTGCCG CCAGCTCGTC CACCGCGCGT CGACGCGCGT GCAGCAGGAA 
CACCGGCGCT TCGACGTATC GCGCGAGCGC CACCGGCAAC TCGTCGAGCG CTTCGCGCGC 
GCCGCGGCAA GCGGCGAGCG CAACGCGATC CGGGCGCTGC TCGCCGACGA CGTGGAACTG 
GTCGGCGACG GCGGCGGCAA GGTGCCGTCG TTCTTCAAGG TGCTGCGCGG CGCGCTCCGG 
ATCGCGAATC TGTATTGGGC CGTCGGCCGA CGCCATGCCG GGCAGATCGA ATACCGGCTC 
GCGCAAATCA ACGGCGAACC GGGCCTGCTG CGCTTCATCG ACGGACGGAT CGAATCGGCA 
CAGGCGTTCG CCACCGACGG CGCGCGGATC GTCGCGATCT ACGCGGTGCG CAATCCGGAC 
AAGCTCGCGC ATATTCCGAA CCGCCCGGCG TGA
 
Protein sequence
MVFQAAFQAH PKNMTETSRP APSDEPFAAL RPRLFSIAYR MLGTRADAED VLQDAWLRWH 
QAERDTLDSP EAWLVTVVTR LSIDRLRAAK AQRDAYVGWW LPEPLVDIDE RTPEAAAEFA 
DDLSVALLWV LERLSPEERA AFLLRQAFER DYAEIAQLLD KSEAACRQLV HRASTRVQQE 
HRRFDVSRER HRQLVERFAR AAASGERNAI RALLADDVEL VGDGGGKVPS FFKVLRGALR 
IANLYWAVGR RHAGQIEYRL AQINGEPGLL RFIDGRIESA QAFATDGARI VAIYAVRNPD 
KLAHIPNRPA