Gene BMA1655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA1655 
Symbol 
ID3088284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand- 
Start bp1729106 
End bp1729771 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content64% 
IMG OID637562335 
ProductDNA-3-methyladenine glycosylase 
Protein accessionYP_103281 
Protein GI53723756 
COG category[L] Replication, recombination and repair 
COG ID[COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00300264 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCGGAAG CCGCCGTGCC CGTGCAGCTT TCCGATGCCG AGACGGTCGC GCGTCCGCCG 
TACTGGGACA AGGCGTGCGC CGATCTCGTC AAGCGCGACC GGATTCTCAA GAAGCTGATC 
CCGAAGTTCG GCCCCGCGCA TCTCGTCAAG CGCGGCGATT CGTTCGTCAC GCTCGCGCGC 
TCGGTGGTCG GCCAGCAGAT CTCGGTGGCC GCCGCGCAGT CGGTCTGGGT CAAGATCGAG 
ACCGCGTGCC CGAAGCTCGC GCCGCCGCAG ATCATCAAGC TCGGCCAGGA AAAACTGATC 
GCGTGCGGGC TGTCGAAACG CAAATCCGAA TATATTCTCG ATCTCGCCCA GCATTTCGTG 
TCGGGCGCGC TTCACGTCGA CAAATGGGCG TCGATGGACG ACGAGGACGT GATCGCCGAG 
CTCACGCAGA TCCGAGGGAT CGGCCGCTGG ACAGCGGAGA TGTTCCTGAT CTTCAATTTG 
TCACGGCCGG ACGTGCTGCC GCTCGACGAT CTGGGGCTCA TTCGCGCGAT CAGCGTCAAT 
TATTTCAGCG GCGAGCCCGT CACGCGCAGC GAGGCGCGCG AAGTGGCGGC GAACTGGGAG 
CCGTGGCGGA CGGTCGCCAC CTGGTACATG TGGCGCAGTC TCGATCCGCT GACCGCTAAT 
AGCTGA
 
Protein sequence
MSEAAVPVQL SDAETVARPP YWDKACADLV KRDRILKKLI PKFGPAHLVK RGDSFVTLAR 
SVVGQQISVA AAQSVWVKIE TACPKLAPPQ IIKLGQEKLI ACGLSKRKSE YILDLAQHFV 
SGALHVDKWA SMDDEDVIAE LTQIRGIGRW TAEMFLIFNL SRPDVLPLDD LGLIRAISVN 
YFSGEPVTRS EAREVAANWE PWRTVATWYM WRSLDPLTAN S